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Protein

Inner membrane protein YohK

Gene

yohK

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12024-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YohK
Gene namesi
Name:yohK
Ordered Locus Names:b2142, JW2130
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12024 yohK

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1PeriplasmicSequence analysis1
Transmembranei2 – 22HelicalSequence analysisAdd BLAST21
Topological domaini23 – 29CytoplasmicSequence analysis7
Transmembranei30 – 50HelicalSequence analysisAdd BLAST21
Topological domaini51 – 90PeriplasmicSequence analysisAdd BLAST40
Transmembranei91 – 111HelicalSequence analysisAdd BLAST21
Topological domaini112 – 118CytoplasmicSequence analysis7
Transmembranei119 – 139HelicalSequence analysisAdd BLAST21
Transmembranei140 – 160HelicalSequence analysisAdd BLAST21
Topological domaini161 – 208CytoplasmicSequence analysisAdd BLAST48
Transmembranei209 – 229HelicalSequence analysisAdd BLAST21
Topological domaini230 – 231PeriplasmicSequence analysis2

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001691401 – 231Inner membrane protein YohKAdd BLAST231

Proteomic databases

PaxDbiP0AD19
PRIDEiP0AD19

Interactioni

Protein-protein interaction databases

BioGridi426083416 interactors.
STRINGi316385.ECDH10B_2299

Structurei

3D structure databases

ProteinModelPortaliP0AD19
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41067MG Bacteria
COG1346 LUCA
HOGENOMiHOG000253604
InParanoidiP0AD19
OMAiIIVILHY
PhylomeDBiP0AD19

Family and domain databases

InterProiView protein in InterPro
IPR005261 CHP00659
IPR007300 CidB/LrgB
PANTHERiPTHR30249 PTHR30249, 1 hit
PfamiView protein in Pfam
PF04172 LrgB, 1 hit
TIGRFAMsiTIGR00659 TIGR00659, 1 hit

Sequencei

Sequence statusi: Complete.

P0AD19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMANIWWSLP LTLIVFFAAR KLAARYKFPL LNPLLVAMVV IIPFLMLTGI
60 70 80 90 100
SYDSYFKGSE VLNDLLQPAV VALAYPLYEQ LHQIRARWKS IITICFIGSV
110 120 130 140 150
VAMVTGTSVA LLMGASPEIA ASILPKSVTT PIAMAVGGSI GGIPAISAVC
160 170 180 190 200
VIFVGILGAV FGHTLLNAMR IRTKAARGLA MGTASHALGT ARCAELDYQE
210 220 230
GAFSSLALVL CGIITSLIAP FLFPIILAVM G
Length:231
Mass (Da):24,470
Last modified:November 22, 2005 - v1
Checksum:i178A705904384DD0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti206 – 231LALVL…LAVMG → ASAGVMRDNYFADRTVPFPD YSGSNGLKFAMRRAFLMYVS RVA (Ref. 1) CuratedAdd BLAST26

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00007 Genomic DNA Translation: AAA60505.1
U00096 Genomic DNA Translation: AAC75203.1
AP009048 Genomic DNA Translation: BAE76619.1
X16419 Genomic DNA No translation available.
PIRiE64982
RefSeqiNP_416647.1, NC_000913.3
WP_000968208.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75203; AAC75203; b2142
BAE76619; BAE76619; BAE76619
GeneIDi949125
KEGGiecj:JW2130
eco:b2142
PATRICifig|1411691.4.peg.100

Similar proteinsi

Entry informationi

Entry nameiYOHK_ECOLI
AccessioniPrimary (citable) accession number: P0AD19
Secondary accession number(s): P33373, Q2MAT7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome