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Protein

Inner membrane protein YebS

Gene

yebS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • response to heat Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7006-MONOMER.
ECOL316407:JW1822-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YebS
Gene namesi
Name:yebS
Ordered Locus Names:b1833, JW1822
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14021. yebS.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 75CytoplasmicSequence analysisAdd BLAST75
Transmembranei76 – 96HelicalSequence analysisAdd BLAST21
Topological domaini97 – 120PeriplasmicSequence analysisAdd BLAST24
Transmembranei121 – 141HelicalSequence analysisAdd BLAST21
Topological domaini142 – 158CytoplasmicSequence analysisAdd BLAST17
Transmembranei159 – 179HelicalSequence analysisAdd BLAST21
Topological domaini180 – 184PeriplasmicSequence analysis5
Transmembranei185 – 205HelicalSequence analysisAdd BLAST21
Topological domaini206 – 269CytoplasmicSequence analysisAdd BLAST64
Transmembranei270 – 290HelicalSequence analysisAdd BLAST21
Topological domaini291 – 310PeriplasmicSequence analysisAdd BLAST20
Transmembranei311 – 331HelicalSequence analysisAdd BLAST21
Topological domaini332 – 350CytoplasmicSequence analysisAdd BLAST19
Transmembranei351 – 371HelicalSequence analysisAdd BLAST21
Topological domaini372 – 382PeriplasmicSequence analysisAdd BLAST11
Transmembranei383 – 403HelicalSequence analysisAdd BLAST21
Topological domaini404 – 427CytoplasmicSequence analysisAdd BLAST24

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001690521 – 427Inner membrane protein YebSAdd BLAST427

Proteomic databases

PaxDbiP0AD03.
PRIDEiP0AD03.

Interactioni

Protein-protein interaction databases

BioGridi4260356. 203 interactors.
DIPiDIP-48172N.
IntActiP0AD03. 2 interactors.
STRINGi511145.b1833.

Structurei

3D structure databases

ProteinModelPortaliP0AD03.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PqiA family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105H2K. Bacteria.
COG2995. LUCA.
HOGENOMiHOG000283617.
KOiK03808.
OMAiPISIIYV.
PhylomeDBiP0AD03.

Family and domain databases

InterProiIPR005219. CHP00155.
IPR011031. Multihaem_cyt.
IPR007498. PqiA.
[Graphical view]
PfamiPF04403. PqiA. 2 hits.
[Graphical view]
TIGRFAMsiTIGR00155. pqiA_fam. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AD03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALNTPQITP TKKITVRAIG EELPRGDYQR CPQCDMLFSL PEINSHQSAY
60 70 80 90 100
CPRCQAKIRD GRDWSLTRLA AMAFTMLLLM PFAWGEPLLH IWLLGIRIDA
110 120 130 140 150
NVMQGIWQMT KQGDAITGSM VFFCVIGAPL ILVTSIAYLW FGNRLGMNLR
160 170 180 190 200
PVLLMLERLK EWVMLDIYLV GIGVASIKVQ DYAHIQAGVG LFSFVALVIL
210 220 230 240 250
TTVTLSHLNV EELWERFYPQ RPATRRDEKL RVCLGCHFTG YPDQRGRCPR
260 270 280 290 300
CHIPLRLRRR HSLQKCWAAL LASIVLLLPA NLLPISIIYL NGGRQEDTIL
310 320 330 340 350
SGIMSLASSN IAVAGIVFIA SILVPFTKVI VMFTLLLSIH FKCQQGLRTR
360 370 380 390 400
ILLLRMVTWI GRWSMLDLFV ISLTMSLINR DQILAFTMGP AAFYFGAAVI
410 420
LTILAVEWLD SRLLWDAHES GNARFDD
Length:427
Mass (Da):48,273
Last modified:November 22, 2005 - v1
Checksum:iB506E3533D88146B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74903.1.
AP009048 Genomic DNA. Translation: BAA15641.1.
PIRiA64945.
RefSeqiNP_416347.1. NC_000913.3.
WP_001207282.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74903; AAC74903; b1833.
BAA15641; BAA15641; BAA15641.
GeneIDi946353.
KEGGiecj:JW1822.
eco:b1833.
PATRICi32118987. VBIEscCol129921_1911.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74903.1.
AP009048 Genomic DNA. Translation: BAA15641.1.
PIRiA64945.
RefSeqiNP_416347.1. NC_000913.3.
WP_001207282.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AD03.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260356. 203 interactors.
DIPiDIP-48172N.
IntActiP0AD03. 2 interactors.
STRINGi511145.b1833.

Proteomic databases

PaxDbiP0AD03.
PRIDEiP0AD03.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74903; AAC74903; b1833.
BAA15641; BAA15641; BAA15641.
GeneIDi946353.
KEGGiecj:JW1822.
eco:b1833.
PATRICi32118987. VBIEscCol129921_1911.

Organism-specific databases

EchoBASEiEB3775.
EcoGeneiEG14021. yebS.

Phylogenomic databases

eggNOGiENOG4105H2K. Bacteria.
COG2995. LUCA.
HOGENOMiHOG000283617.
KOiK03808.
OMAiPISIIYV.
PhylomeDBiP0AD03.

Enzyme and pathway databases

BioCyciEcoCyc:G7006-MONOMER.
ECOL316407:JW1822-MONOMER.

Miscellaneous databases

PROiP0AD03.

Family and domain databases

InterProiIPR005219. CHP00155.
IPR011031. Multihaem_cyt.
IPR007498. PqiA.
[Graphical view]
PfamiPF04403. PqiA. 2 hits.
[Graphical view]
TIGRFAMsiTIGR00155. pqiA_fam. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYEBS_ECOLI
AccessioniPrimary (citable) accession number: P0AD03
Secondary accession number(s): O07977, O07979, P76271
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: November 2, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.