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Protein

Uncharacterized protein YdcA

Gene

ydcA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11219-MONOMER.
ECOL316407:JW1416-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdcA
Gene namesi
Name:ydcA
Ordered Locus Names:b1419, JW1416
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11219. ydcA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 5737Uncharacterized protein YdcAPRO_0000013835Add
BLAST

Proteomic databases

PaxDbiP0ACW4.

Interactioni

Protein-protein interaction databases

BioGridi4262883. 8 interactions.
IntActiP0ACW4. 1 interaction.
STRINGi511145.b1419.

Structurei

3D structure databases

ProteinModelPortaliP0ACW4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105UPP. Bacteria.
ENOG4111SBQ. LUCA.
HOGENOMiHOG000277935.
OMAiGKFICND.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0ACW4-1 [UniParc]FASTAAdd to basket

« Hide

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MKKLALILFM GTLVSFYADA GRKPCSGSKG GISHCTAGGK FVCNDGSISA

SKKTCTN
Length:57
Mass (Da):5,860
Last modified:November 22, 2005 - v1
Checksum:iE3EEC6290D021B75
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti25 – 284CSGS → VLVR in CAA30455 (PubMed:2836696).Curated
Sequence conflicti32 – 5726ISHCT…KTCTN → SHTVRQAANLSVMMVLLVHR KKHALT (PubMed:2836696).CuratedAdd
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07569 Genomic DNA. Translation: CAA30455.1.
U00096 Genomic DNA. Translation: AAC74501.1.
AP009048 Genomic DNA. Translation: BAA15040.1.
PIRiF64893.
S00694.
RefSeqiNP_415936.1. NC_000913.3.
WP_000731833.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74501; AAC74501; b1419.
BAA15040; BAA15040; BAA15040.
GeneIDi945986.
KEGGiecj:JW1416.
eco:b1419.
PATRICi32118126. VBIEscCol129921_1483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07569 Genomic DNA. Translation: CAA30455.1.
U00096 Genomic DNA. Translation: AAC74501.1.
AP009048 Genomic DNA. Translation: BAA15040.1.
PIRiF64893.
S00694.
RefSeqiNP_415936.1. NC_000913.3.
WP_000731833.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ACW4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262883. 8 interactions.
IntActiP0ACW4. 1 interaction.
STRINGi511145.b1419.

Proteomic databases

PaxDbiP0ACW4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74501; AAC74501; b1419.
BAA15040; BAA15040; BAA15040.
GeneIDi945986.
KEGGiecj:JW1416.
eco:b1419.
PATRICi32118126. VBIEscCol129921_1483.

Organism-specific databases

EchoBASEiEB1202.
EcoGeneiEG11219. ydcA.

Phylogenomic databases

eggNOGiENOG4105UPP. Bacteria.
ENOG4111SBQ. LUCA.
HOGENOMiHOG000277935.
OMAiGKFICND.

Enzyme and pathway databases

BioCyciEcoCyc:EG11219-MONOMER.
ECOL316407:JW1416-MONOMER.

Miscellaneous databases

PROiP0ACW4.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYDCA_ECOLI
AccessioniPrimary (citable) accession number: P0ACW4
Secondary accession number(s): P23864, P77469
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 7, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.