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Protein

Uncharacterized HTH-type transcriptional regulator YihL

Gene

yihL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi33 – 52H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

  • transcription, DNA-templated Source: EcoCyc

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:EG11838-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YihL
Gene namesi
Name:yihL
Ordered Locus Names:b3872, JW3843
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi

Organism-specific databases

EcoGeneiEG11838 yihL

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000506831 – 236Uncharacterized HTH-type transcriptional regulator YihLAdd BLAST236

Proteomic databases

PaxDbiP0ACM9
PRIDEiP0ACM9

Interactioni

Protein-protein interaction databases

BioGridi4262632, 9 interactors
IntActiP0ACM9, 9 interactors
STRINGi316385.ECDH10B_4062

Structurei

3D structure databases

ProteinModelPortaliP0ACM9
SMRiP0ACM9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 73HTH gntR-typePROSITE-ProRule annotationAdd BLAST69

Phylogenomic databases

eggNOGiENOG4108K85 Bacteria
COG2188 LUCA
HOGENOMiHOG000009654
InParanoidiP0ACM9
OMAiFYHETFI
PhylomeDBiP0ACM9

Family and domain databases

CDDicd07377 WHTH_GntR, 1 hit
Gene3Di1.10.10.10, 1 hit
3.40.1410.10, 1 hit
InterProiView protein in InterPro
IPR028978 Chorismate_lyase_/UTRA_dom_sf
IPR000524 Tscrpt_reg_HTH_GntR
IPR011663 UTRA
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00392 GntR, 1 hit
PF07702 UTRA, 1 hit
PRINTSiPR00035 HTHGNTR
SMARTiView protein in SMART
SM00345 HTH_GNTR, 1 hit
SM00866 UTRA, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF64288 SSF64288, 1 hit
PROSITEiView protein in PROSITE
PS50949 HTH_GNTR, 1 hit

Sequencei

Sequence statusi: Complete.

P0ACM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAENQSTVEN AKEKLDRWLK DGITTPGGKL PSERELGELL GIKRMTLRQA
60 70 80 90 100
LLNLEAESKI FRKDRKGWFV TQPRFNYSPE LSASFQRAAI EQGREPSWGF
110 120 130 140 150
TEKNRTSDIP ETLAPLIAVT PSTELYRITG WGALEGHKVF YHETYINPEV
160 170 180 190 200
APGFIEQLEN HSFSAVWEKC YQKETVVKKL IFKPVRMPGD ISKYLGGSAG
210 220 230
MPAILIEKHR ADQQGNIVQI DIEYWRFEAV DLIINL
Length:236
Mass (Da):26,939
Last modified:November 22, 2005 - v1
Checksum:i729349BD0C70F778
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA Translation: AAB03006.1
U00096 Genomic DNA Translation: AAC76869.1
AP009048 Genomic DNA Translation: BAE77437.1
PIRiS40817
RefSeqiNP_418308.1, NC_000913.3
WP_000829798.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76869; AAC76869; b3872
BAE77437; BAE77437; BAE77437
GeneIDi948368
KEGGiecj:JW3843
eco:b3872
PATRICifig|1411691.4.peg.2839

Entry informationi

Entry nameiYIHL_ECOLI
AccessioniPrimary (citable) accession number: P0ACM9
Secondary accession number(s): P32133, Q2M8G9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: March 28, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

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