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Protein

Uncharacterized HTH-type transcriptional regulator YegW

Gene

yegW

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi50 – 69H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7133-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YegW
Gene namesi
Name:yegW
Ordered Locus Names:b2101, JW2088
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14066 yegW

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000506761 – 248Uncharacterized HTH-type transcriptional regulator YegWAdd BLAST248

Proteomic databases

PaxDbiP0ACM5
PRIDEiP0ACM5

Interactioni

Protein-protein interaction databases

BioGridi4261161, 11 interactors
DIPiDIP-11893N
IntActiP0ACM5, 2 interactors
STRINGi316385.ECDH10B_2254

Structurei

3D structure databases

ProteinModelPortaliP0ACM5
SMRiP0ACM5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 90HTH gntR-typePROSITE-ProRule annotationAdd BLAST69

Phylogenomic databases

eggNOGiENOG4105FDP Bacteria
COG2188 LUCA
HOGENOMiHOG000228717
InParanoidiP0ACM5
OMAiYYVGERF
PhylomeDBiP0ACM5

Family and domain databases

CDDicd07377 WHTH_GntR, 1 hit
Gene3Di1.10.10.10, 1 hit
3.40.1410.10, 1 hit
InterProiView protein in InterPro
IPR028978 Chorismate_lyase_/UTRA_dom_sf
IPR000524 Tscrpt_reg_HTH_GntR
IPR011663 UTRA
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00392 GntR, 1 hit
PF07702 UTRA, 1 hit
PRINTSiPR00035 HTHGNTR
SMARTiView protein in SMART
SM00345 HTH_GNTR, 1 hit
SM00866 UTRA, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF64288 SSF64288, 1 hit
PROSITEiView protein in PROSITE
PS50949 HTH_GNTR, 1 hit

Sequencei

Sequence statusi: Complete.

P0ACM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE
60 70 80 90 100
RDLSQLTGVS RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG
110 120 130 140 150
FSQQVVLRGK KPDTLWVNKR VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD
160 170 180 190 200
EEAVSIEESW VPAHLIHDVD AIGISLYDYF RSQHIYPQRT RSRVSARMPD
210 220 230 240
AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD LYVFVCEE
Length:248
Mass (Da):28,277
Last modified:November 22, 2005 - v1
Checksum:iE4B3CD729CA7F1C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75162.1
AP009048 Genomic DNA Translation: BAA15969.1
PIRiD64977
RefSeqiNP_416604.1, NC_000913.3
WP_000434038.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75162; AAC75162; b2101
BAA15969; BAA15969; BAA15969
GeneIDi946639
KEGGiecj:JW2088
eco:b2101
PATRICifig|1411691.4.peg.146

Similar proteinsi

Entry informationi

Entry nameiYEGW_ECOLI
AccessioniPrimary (citable) accession number: P0ACM5
Secondary accession number(s): O08014, P76420
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: March 28, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
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