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P0ACM5 (YEGW_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized HTH-type transcriptional regulator YegW
Gene names
Name:yegW
Ordered Locus Names:b2101, JW2088
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length248 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 248248Uncharacterized HTH-type transcriptional regulator YegW
PRO_0000050676

Regions

Domain22 – 9069HTH gntR-type
DNA binding50 – 6920H-T-H motif Potential

Sequences

Sequence LengthMass (Da)Tools
P0ACM5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: E4B3CD729CA7F1C8

FASTA24828,277
        10         20         30         40         50         60 
MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE RDLSQLTGVS 

        70         80         90        100        110        120 
RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR 

       130        140        150        160        170        180 
VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD EEAVSIEESW VPAHLIHDVD AIGISLYDYF 

       190        200        210        220        230        240 
RSQHIYPQRT RSRVSARMPD AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD 


LYVFVCEE 

« Hide

References

[1]"A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map."
Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S. expand/collapse author list , Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y., Horiuchi T.
DNA Res. 3:379-392(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. Translation: AAC75162.1.
AP009048 Genomic DNA. Translation: BAA15969.1.
PIRD64977.
RefSeqNP_416604.1. NC_000913.3.
YP_490341.1. NC_007779.1.

3D structure databases

ProteinModelPortalP0ACM5.
SMRP0ACM5. Positions 15-245.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-11893N.
IntActP0ACM5. 2 interactions.
STRING511145.b2101.

Proteomic databases

PRIDEP0ACM5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75162; AAC75162; b2101.
BAA15969; BAA15969; BAA15969.
GeneID12932167.
946639.
KEGGecj:Y75_p2063.
eco:b2101.
PATRIC32119535. VBIEscCol129921_2178.

Organism-specific databases

EchoBASEEB3819.
EcoGeneEG14066. yegW.

Phylogenomic databases

eggNOGCOG2188.
HOGENOMHOG000228717.
OMANTMSAND.
OrthoDBEOG689HVZ.
PhylomeDBP0ACM5.
ProtClustDBCLSK880289.

Enzyme and pathway databases

BioCycEcoCyc:G7133-MONOMER.
ECOL316407:JW2088-MONOMER.

Gene expression databases

GenevestigatorP0ACM5.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR000524. Tscrpt_reg_HTH_GntR.
IPR011663. UTRA.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00392. GntR. 1 hit.
PF07702. UTRA. 1 hit.
[Graphical view]
PRINTSPR00035. HTHGNTR.
SMARTSM00345. HTH_GNTR. 1 hit.
SM00866. UTRA. 1 hit.
[Graphical view]
PROSITEPS50949. HTH_GNTR. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP0ACM5.

Entry information

Entry nameYEGW_ECOLI
AccessionPrimary (citable) accession number: P0ACM5
Secondary accession number(s): O08014, P76420
Entry history
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: April 16, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene