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P0ACM5

- YEGW_ECOLI

UniProt

P0ACM5 - YEGW_ECOLI

Protein

Uncharacterized HTH-type transcriptional regulator YegW

Gene

yegW

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    DNA bindingi50 – 6920H-T-H motifPROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciEcoCyc:G7133-MONOMER.
    ECOL316407:JW2088-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized HTH-type transcriptional regulator YegW
    Gene namesi
    Name:yegW
    Ordered Locus Names:b2101, JW2088
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG14066. yegW.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 248248Uncharacterized HTH-type transcriptional regulator YegWPRO_0000050676Add
    BLAST

    Proteomic databases

    PRIDEiP0ACM5.

    Expressioni

    Gene expression databases

    GenevestigatoriP0ACM5.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-11893N.
    IntActiP0ACM5. 2 interactions.
    STRINGi511145.b2101.

    Structurei

    3D structure databases

    ProteinModelPortaliP0ACM5.
    SMRiP0ACM5. Positions 23-245.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini22 – 9069HTH gntR-typePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 HTH gntR-type DNA-binding domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG2188.
    HOGENOMiHOG000228717.
    OMAiPIEYNLG.
    OrthoDBiEOG689HVZ.
    PhylomeDBiP0ACM5.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    3.40.1410.10. 1 hit.
    InterProiIPR028978. Chorismate_lyase_/UTRA_dom.
    IPR000524. Tscrpt_reg_HTH_GntR.
    IPR011663. UTRA.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00392. GntR. 1 hit.
    PF07702. UTRA. 1 hit.
    [Graphical view]
    PRINTSiPR00035. HTHGNTR.
    SMARTiSM00345. HTH_GNTR. 1 hit.
    SM00866. UTRA. 1 hit.
    [Graphical view]
    SUPFAMiSSF64288. SSF64288. 1 hit.
    PROSITEiPS50949. HTH_GNTR. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P0ACM5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE    50
    RDLSQLTGVS RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG 100
    FSQQVVLRGK KPDTLWVNKR VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD 150
    EEAVSIEESW VPAHLIHDVD AIGISLYDYF RSQHIYPQRT RSRVSARMPD 200
    AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD LYVFVCEE 248
    Length:248
    Mass (Da):28,277
    Last modified:November 22, 2005 - v1
    Checksum:iE4B3CD729CA7F1C8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75162.1.
    AP009048 Genomic DNA. Translation: BAA15969.1.
    PIRiD64977.
    RefSeqiNP_416604.1. NC_000913.3.
    YP_490341.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75162; AAC75162; b2101.
    BAA15969; BAA15969; BAA15969.
    GeneIDi12932167.
    946639.
    KEGGiecj:Y75_p2063.
    eco:b2101.
    PATRICi32119535. VBIEscCol129921_2178.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75162.1 .
    AP009048 Genomic DNA. Translation: BAA15969.1 .
    PIRi D64977.
    RefSeqi NP_416604.1. NC_000913.3.
    YP_490341.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P0ACM5.
    SMRi P0ACM5. Positions 23-245.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-11893N.
    IntActi P0ACM5. 2 interactions.
    STRINGi 511145.b2101.

    Proteomic databases

    PRIDEi P0ACM5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75162 ; AAC75162 ; b2101 .
    BAA15969 ; BAA15969 ; BAA15969 .
    GeneIDi 12932167.
    946639.
    KEGGi ecj:Y75_p2063.
    eco:b2101.
    PATRICi 32119535. VBIEscCol129921_2178.

    Organism-specific databases

    EchoBASEi EB3819.
    EcoGenei EG14066. yegW.

    Phylogenomic databases

    eggNOGi COG2188.
    HOGENOMi HOG000228717.
    OMAi PIEYNLG.
    OrthoDBi EOG689HVZ.
    PhylomeDBi P0ACM5.

    Enzyme and pathway databases

    BioCyci EcoCyc:G7133-MONOMER.
    ECOL316407:JW2088-MONOMER.

    Miscellaneous databases

    PROi P0ACM5.

    Gene expression databases

    Genevestigatori P0ACM5.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    3.40.1410.10. 1 hit.
    InterProi IPR028978. Chorismate_lyase_/UTRA_dom.
    IPR000524. Tscrpt_reg_HTH_GntR.
    IPR011663. UTRA.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00392. GntR. 1 hit.
    PF07702. UTRA. 1 hit.
    [Graphical view ]
    PRINTSi PR00035. HTHGNTR.
    SMARTi SM00345. HTH_GNTR. 1 hit.
    SM00866. UTRA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF64288. SSF64288. 1 hit.
    PROSITEi PS50949. HTH_GNTR. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

    Entry informationi

    Entry nameiYEGW_ECOLI
    AccessioniPrimary (citable) accession number: P0ACM5
    Secondary accession number(s): O08014, P76420
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3