Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative aga operon transcriptional repressor

Gene

agaR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Probable repressor for the aga operon for N-acetyl galactosamine transport and metabolism.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi32 – 51H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

  • DNA binding Source: EcoCyc
  • DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  • regulation of transcription, DNA-templated Source: EcoCyc
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7630-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative aga operon transcriptional repressor
Gene namesi
Name:agaR
Synonyms:yhaW
Ordered Locus Names:b3131, JW3100
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12762 agaR

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000502411 – 269Putative aga operon transcriptional repressorAdd BLAST269

Proteomic databases

PaxDbiP0ACK2
PRIDEiP0ACK2

Interactioni

Protein-protein interaction databases

BioGridi4262414, 8 interactors
DIPiDIP-48095N
IntActiP0ACK2, 4 interactors
STRINGi316385.ECDH10B_3304

Structurei

3D structure databases

ProteinModelPortaliP0ACK2
SMRiP0ACK2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 70HTH deoR-typePROSITE-ProRule annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4105E98 Bacteria
COG1349 LUCA
HOGENOMiHOG000224684
InParanoidiP0ACK2
KOiK02081
OMAiKMCEVAE
PhylomeDBiP0ACK2

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR014036 DeoR_C
IPR001034 DeoR_HTH
IPR037171 NagB/RpiA_transferase-like
IPR018356 Tscrpt_reg_HTH_DeoR_CS
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00455 DeoRC, 1 hit
PF08220 HTH_DeoR, 1 hit
SMARTiView protein in SMART
SM00420 HTH_DEOR, 1 hit
SUPFAMiSSF100950 SSF100950, 1 hit
SSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00894 HTH_DEOR_1, 1 hit
PS51000 HTH_DEOR_2, 1 hit

Sequencei

Sequence statusi: Complete.

P0ACK2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNTDASGEK RVTGTSERRE QIIQRLRQQG SVQVNDLSAL YGVSTVTIRN
60 70 80 90 100
DLAFLEKQGI AVRAYGGALI CDSTTPSVEP SVEDKSALNT AMKRSVAKAA
110 120 130 140 150
VELIQPGHRV ILDSGTTTFE IARLMRKHTD VIAMTNGMNV ANALLEAEGV
160 170 180 190 200
ELLMTGGHLR RQSQSFYGDQ AEQSLQNYHF DMLFLGVDAI DLERGVSTHN
210 220 230 240 250
EDEARLNRRM CEVAERIIVV TDSSKFNRSS LHKIIDTQRI DMIIVDEGIP
260
ADSLEGLRKA GVEVILVGE
Length:269
Mass (Da):29,572
Last modified:November 22, 2005 - v1
Checksum:i73B5C19B357AE014
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF228498 Genomic DNA Translation: AAF81081.1
U18997 Genomic DNA Translation: AAA57934.1
U00096 Genomic DNA Translation: AAC76165.1
AP009048 Genomic DNA Translation: BAE77178.1
PIRiG65102
RefSeqiNP_417600.1, NC_000913.3
WP_000072187.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76165; AAC76165; b3131
BAE77178; BAE77178; BAE77178
GeneIDi947636
KEGGiecj:JW3100
eco:b3131
PATRICifig|1411691.4.peg.3600

Entry informationi

Entry nameiAGAR_ECOLI
AccessioniPrimary (citable) accession number: P0ACK2
Secondary accession number(s): P42902, Q2M978
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: March 28, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health