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Protein

Sugar fermentation stimulation protein B

Gene

sfsB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is involved in positive regulation of the metabolism of sugars.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi50 – 6920H-T-H motifBy similarityAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription, DNA-templated Source: EcoCyc
  • transcription, DNA-templated Source: EcoCyc
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG10656-MONOMER.
ECOL316407:JW3155-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Sugar fermentation stimulation protein B
Alternative name(s):
Ner-like protein
Gene namesi
Name:sfsB
Synonyms:nlp, sfs7
Ordered Locus Names:b3188, JW3155
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10656. nlp.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292Sugar fermentation stimulation protein BPRO_0000062779Add
BLAST

Proteomic databases

PaxDbiP0ACH1.
PRIDEiP0ACH1.

Interactioni

Protein-protein interaction databases

BioGridi4263464. 4 interactions.
IntActiP0ACH1. 6 interactions.
STRINGi511145.b3188.

Structurei

3D structure databases

ProteinModelPortaliP0ACH1.
SMRiP0ACH1. Positions 7-70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105HVQ. Bacteria.
COG3423. LUCA.
HOGENOMiHOG000040880.
KOiK07724.
OMAiYHDPITH.
OrthoDBiEOG60CWRG.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.

Sequencei

Sequence statusi: Complete.

P0ACH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESNFIDWHP ADIIAGLRKK GTSMAAESRR NGLSSSTLAN ALSRPWPKGE
60 70 80 90
MIIAKALGTD PWVIWPSRYH DPQTHEFIDR TQLMRSYTKP KK
Length:92
Mass (Da):10,495
Last modified:November 22, 2005 - v1
Checksum:i4B3859604F4259EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68873 Genomic DNA. Translation: CAA48736.1.
U18997 Genomic DNA. Translation: AAA57989.1.
U00096 Genomic DNA. Translation: AAC76220.1.
AP009048 Genomic DNA. Translation: BAE77232.1.
PIRiJV0027. BVECNP.
RefSeqiNP_417655.1. NC_000913.3.
WP_000445413.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76220; AAC76220; b3188.
BAE77232; BAE77232; BAE77232.
GeneIDi947960.
KEGGiecj:JW3155.
eco:b3188.
PATRICi32121796. VBIEscCol129921_3282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68873 Genomic DNA. Translation: CAA48736.1.
U18997 Genomic DNA. Translation: AAA57989.1.
U00096 Genomic DNA. Translation: AAC76220.1.
AP009048 Genomic DNA. Translation: BAE77232.1.
PIRiJV0027. BVECNP.
RefSeqiNP_417655.1. NC_000913.3.
WP_000445413.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ACH1.
SMRiP0ACH1. Positions 7-70.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263464. 4 interactions.
IntActiP0ACH1. 6 interactions.
STRINGi511145.b3188.

Proteomic databases

PaxDbiP0ACH1.
PRIDEiP0ACH1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76220; AAC76220; b3188.
BAE77232; BAE77232; BAE77232.
GeneIDi947960.
KEGGiecj:JW3155.
eco:b3188.
PATRICi32121796. VBIEscCol129921_3282.

Organism-specific databases

EchoBASEiEB0650.
EcoGeneiEG10656. nlp.

Phylogenomic databases

eggNOGiENOG4105HVQ. Bacteria.
COG3423. LUCA.
HOGENOMiHOG000040880.
KOiK07724.
OMAiYHDPITH.
OrthoDBiEOG60CWRG.

Enzyme and pathway databases

BioCyciEcoCyc:EG10656-MONOMER.
ECOL316407:JW3155-MONOMER.

Miscellaneous databases

PROiP0ACH1.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and sequencing of an Escherichia coli gene, nlp, highly homologous to the ner genes of bacteriophages Mu and D108."
    Choi Y.-L., Nishida T., Kawamukai M., Utsumi R., Sakai H., Komano T.
    J. Bacteriol. 171:5222-5225(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiSFSB_ECOLI
AccessioniPrimary (citable) accession number: P0ACH1
Secondary accession number(s): P18837, Q2M924
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: January 20, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.