ID FRDB_ECOLI Reviewed; 244 AA. AC P0AC47; P00364; Q2M6E9; DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot. DT 23-JAN-2007, sequence version 2. DT 27-MAR-2024, entry version 142. DE RecName: Full=Fumarate reductase iron-sulfur subunit; DE EC=1.3.5.1 {ECO:0000269|PubMed:11850430}; DE AltName: Full=Quinol-fumarate reductase iron-sulfur subunit {ECO:0000303|PubMed:11850430}; DE Short=QFR iron-sulfur subunit {ECO:0000303|PubMed:11850430}; GN Name=frdB; OrderedLocusNames=b4153, JW4114; OS Escherichia coli (strain K12). OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=83333; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 2-9. RC STRAIN=K12; RX PubMed=6751816; DOI=10.1111/j.1432-1033.1982.tb06768.x; RA Cole S.T., Grundstroem T., Jaurin B., Robinson J.J., Weiner J.H.; RT "Location and nucleotide sequence of frdB, the gene coding for the iron- RT sulphur protein subunit of the fumarate reductase of Escherichia coli."; RL Eur. J. Biochem. 126:211-216(1982). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12 / MG1655 / ATCC 47076; RX PubMed=7610040; DOI=10.1093/nar/23.12.2105; RA Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.; RT "Analysis of the Escherichia coli genome VI: DNA sequence of the region RT from 92.8 through 100 minutes."; RL Nucleic Acids Res. 23:2105-2119(1995). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12 / MG1655 / ATCC 47076; RX PubMed=9278503; DOI=10.1126/science.277.5331.1453; RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., RA Shao Y.; RT "The complete genome sequence of Escherichia coli K-12."; RL Science 277:1453-1462(1997). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911; RX PubMed=16738553; DOI=10.1038/msb4100049; RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.; RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 RT and W3110."; RL Mol. Syst. Biol. 2:E1-E5(2006). RN [5] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 236-244. RX PubMed=7041115; DOI=10.1073/pnas.79.4.1111; RA Grundstroem T., Jaurin B.; RT "Overlap between ampC and frd operons on the Escherichia coli chromosome."; RL Proc. Natl. Acad. Sci. U.S.A. 79:1111-1115(1982). RN [6] RP MUTAGENESIS OF CYS-58; CYS-63; CYS-66 AND CYS-78. RX PubMed=2174169; DOI=10.1073/pnas.87.22.8965; RA Werth M.T., Cecchini G., Manodori A., Ackrell B.A.C., Schroeder I., RA Gunsalus R.P., Johnson M.K.; RT "Site-directed mutagenesis of conserved cysteine residues in Escherichia RT coli fumarate reductase: modification of the spectroscopic and RT electrochemical properties of the [2Fe-2S] cluster."; RL Proc. Natl. Acad. Sci. U.S.A. 87:8965-8969(1990). RN [7] RP IDENTIFICATION BY 2D-GEL. RX PubMed=9298644; DOI=10.1002/elps.1150180805; RA VanBogelen R.A., Abshire K.Z., Moldover B., Olson E.R., Neidhardt F.C.; RT "Escherichia coli proteome analysis using the gene-protein database."; RL Electrophoresis 18:1243-1251(1997). RN [8] RP X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) IN COMPLEX WITH IRON-SULFUR (2FE-2S); RP IRON-SULFUR (3FE-4S); IRON-SULFUR (4FE-4S) AND MENAQUINONE, COFACTOR, RP SUBUNIT, AND SUBCELLULAR LOCATION. RX PubMed=10373108; DOI=10.1126/science.284.5422.1961; RA Iverson T.M., Luna-Chavez C., Cecchini G., Rees D.C.; RT "Structure of the Escherichia coli fumarate reductase respiratory RT complex."; RL Science 284:1961-1966(1999). RN [9] {ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, ECO:0007744|PDB:1L0V} RP X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF 2-244 IN COMPLEX WITH IRON-SULFUR RP (2FE-2S); IRON-SULFUR (3FE-4S); IRON-SULFUR (4FE-4S); MENAQUINONE AND RP INHIBITORS, AND SUBUNIT. RX PubMed=11850430; DOI=10.1074/jbc.m200815200; RA Iverson T.M., Luna-Chavez C., Croal L.R., Cecchini G., Rees D.C.; RT "Crystallographic studies of the Escherichia coli quinol-fumarate reductase RT with inhibitors bound to the quinol-binding site."; RL J. Biol. Chem. 277:16124-16130(2002). CC -!- FUNCTION: Two distinct, membrane-bound, FAD-containing enzymes are CC responsible for the catalysis of fumarate and succinate CC interconversion; fumarate reductase is used during anaerobic growth, CC and succinate dehydrogenase is used during aerobic growth. The QFR CC enzyme complex binds 2 quinones in or near the membrane; 1 near the CC [3Fe-4S] cluster (QP is proximal to the [3Fe-4S] cluster, on the CC cytoplasmic side of the membrane) while QD (the distal cluster) is on CC the other side of the membrane. It is not clear if both of the quinol- CC binding sites are functionally relevant (PubMed:10373108, CC PubMed:11850430). {ECO:0000269|PubMed:10373108, CC ECO:0000269|PubMed:11850430}. CC -!- CATALYTIC ACTIVITY: CC Reaction=a quinone + succinate = a quinol + fumarate; CC Xref=Rhea:RHEA:40523, ChEBI:CHEBI:24646, ChEBI:CHEBI:29806, CC ChEBI:CHEBI:30031, ChEBI:CHEBI:132124; EC=1.3.5.1; CC Evidence={ECO:0000269|PubMed:11850430}; CC -!- CATALYTIC ACTIVITY: CC Reaction=a menaquinone + succinate = a menaquinol + fumarate; CC Xref=Rhea:RHEA:27834, Rhea:RHEA-COMP:9537, Rhea:RHEA-COMP:9539, CC ChEBI:CHEBI:16374, ChEBI:CHEBI:18151, ChEBI:CHEBI:29806, CC ChEBI:CHEBI:30031; EC=1.3.5.1; CC Evidence={ECO:0000305|PubMed:10373108}; CC -!- COFACTOR: CC Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:190135; CC Evidence={ECO:0000269|PubMed:10373108}; CC Note=Binds 1 [2Fe-2S] cluster. {ECO:0000269|PubMed:10373108}; CC -!- COFACTOR: CC Name=[3Fe-4S] cluster; Xref=ChEBI:CHEBI:21137; CC Evidence={ECO:0000269|PubMed:10373108}; CC Note=Binds 1 [3Fe-4S] cluster. {ECO:0000269|PubMed:10373108}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000269|PubMed:10373108}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000269|PubMed:10373108}; CC -!- SUBUNIT: Part of an enzyme complex containing four subunits: a CC flavoprotein (FrdA), an iron-sulfur protein (FrdB), and two hydrophobic CC anchor proteins (FrdC and FrdD). {ECO:0000269|PubMed:10373108, CC ECO:0000269|PubMed:11850430}. CC -!- INTERACTION: CC P0AC47; P00363: frdA; NbExp=4; IntAct=EBI-906724, EBI-550480; CC P0AC47; P08337: mutT; NbExp=4; IntAct=EBI-906724, EBI-1121389; CC P0AC47; P0A915: ompW; NbExp=2; IntAct=EBI-906724, EBI-1132929; CC -!- SUBCELLULAR LOCATION: Cell inner membrane CC {ECO:0000305|PubMed:10373108}; Peripheral membrane protein CC {ECO:0000305|PubMed:10373108}; Cytoplasmic side CC {ECO:0000305|PubMed:10373108}. CC -!- SIMILARITY: Belongs to the succinate dehydrogenase/fumarate reductase CC iron-sulfur protein family. {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; J01611; AAA23438.1; -; Genomic_DNA. DR EMBL; U14003; AAA97052.1; -; Genomic_DNA. DR EMBL; U00096; AAC77113.1; -; Genomic_DNA. DR EMBL; AP009048; BAE78157.1; -; Genomic_DNA. DR EMBL; V00277; CAA23534.1; -; Genomic_DNA. DR PIR; A00377; RDECFS. DR RefSeq; NP_418577.1; NC_000913.3. DR RefSeq; WP_000829498.1; NZ_STEB01000014.1. DR PDB; 1KF6; X-ray; 2.70 A; B/N=2-244. DR PDB; 1KFY; X-ray; 3.60 A; B/N=2-244. DR PDB; 1L0V; X-ray; 3.30 A; B/N=2-244. DR PDB; 2B76; X-ray; 3.30 A; B/N=2-244. DR PDB; 3CIR; X-ray; 3.65 A; B/N=2-244. DR PDB; 3P4P; X-ray; 2.80 A; B/N=2-244. DR PDB; 3P4Q; X-ray; 3.35 A; B/N=2-244. DR PDB; 3P4R; X-ray; 3.05 A; B/N=2-244. DR PDB; 3P4S; X-ray; 3.10 A; B/N=2-244. DR PDB; 5VPN; X-ray; 4.22 A; B/F=2-244. DR PDB; 6AWF; X-ray; 3.35 A; B/F=2-244. DR PDBsum; 1KF6; -. DR PDBsum; 1KFY; -. DR PDBsum; 1L0V; -. DR PDBsum; 2B76; -. DR PDBsum; 3CIR; -. DR PDBsum; 3P4P; -. DR PDBsum; 3P4Q; -. DR PDBsum; 3P4R; -. DR PDBsum; 3P4S; -. DR PDBsum; 5VPN; -. DR PDBsum; 6AWF; -. DR AlphaFoldDB; P0AC47; -. DR SMR; P0AC47; -. DR BioGRID; 4262701; 452. DR BioGRID; 852958; 2. DR ComplexPortal; CPX-1967; Plasma membrane fumarate reductase complex. DR DIP; DIP-9682N; -. DR IntAct; P0AC47; 7. DR STRING; 511145.b4153; -. DR DrugBank; DB07490; 2-[1-(4-CHLORO-PHENYL)-ETHYL]-4,6-DINITRO-PHENOL. DR DrugBank; DB07918; 2-heptyl-4-hydroxyquinoline N-oxide. DR jPOST; P0AC47; -. DR PaxDb; 511145-b4153; -. DR EnsemblBacteria; AAC77113; AAC77113; b4153. DR GeneID; 83579162; -. DR GeneID; 948666; -. DR KEGG; ecj:JW4114; -. DR KEGG; eco:b4153; -. DR PATRIC; fig|1411691.4.peg.2545; -. DR EchoBASE; EB0327; -. DR eggNOG; COG0479; Bacteria. DR HOGENOM; CLU_044838_3_2_6; -. DR InParanoid; P0AC47; -. DR OMA; CPKGISL; -. DR OrthoDB; 9804391at2; -. DR PhylomeDB; P0AC47; -. DR BioCyc; EcoCyc:FUM-FE-S; -. DR BioCyc; MetaCyc:FUM-FE-S; -. DR EvolutionaryTrace; P0AC47; -. DR PRO; PR:P0AC47; -. DR Proteomes; UP000000318; Chromosome. DR Proteomes; UP000000625; Chromosome. DR GO; GO:0005829; C:cytosol; IDA:EcoCyc. DR GO; GO:0016020; C:membrane; IDA:ComplexPortal. DR GO; GO:0045284; C:plasma membrane fumarate reductase complex; IDA:EcoCyc. DR GO; GO:0051537; F:2 iron, 2 sulfur cluster binding; IDA:EcoCyc. DR GO; GO:0051538; F:3 iron, 4 sulfur cluster binding; IDA:EcoCyc. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IDA:EcoCyc. DR GO; GO:0009055; F:electron transfer activity; IDA:EcoCyc. DR GO; GO:0102040; F:fumarate reductase (menaquinone); IEA:RHEA. DR GO; GO:0051536; F:iron-sulfur cluster binding; ISM:EcoCyc. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0019645; P:anaerobic electron transport chain; NAS:ComplexPortal. DR GO; GO:0009061; P:anaerobic respiration; IMP:EcoCyc. DR GO; GO:0044780; P:bacterial-type flagellum assembly; IMP:EcoCyc. DR GO; GO:0006113; P:fermentation; IMP:EcoCyc. DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW. DR Gene3D; 3.10.20.30; -; 1. DR Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1. DR InterPro; IPR036010; 2Fe-2S_ferredoxin-like_sf. DR InterPro; IPR001041; 2Fe-2S_ferredoxin-type. DR InterPro; IPR006058; 2Fe2S_fd_BS. DR InterPro; IPR017896; 4Fe4S_Fe-S-bd. DR InterPro; IPR017900; 4Fe4S_Fe_S_CS. DR InterPro; IPR012675; Beta-grasp_dom_sf. DR InterPro; IPR009051; Helical_ferredxn. DR InterPro; IPR004489; Succ_DH/fum_Rdtase_Fe-S. DR InterPro; IPR025192; Succ_DH/fum_Rdtase_N. DR NCBIfam; TIGR00384; dhsB; 1. DR PANTHER; PTHR43551; FUMARATE REDUCTASE IRON-SULFUR SUBUNIT; 1. DR PANTHER; PTHR43551:SF2; FUMARATE REDUCTASE IRON-SULFUR SUBUNIT; 1. DR Pfam; PF13085; Fer2_3; 1. DR Pfam; PF13237; Fer4_10; 1. DR SUPFAM; SSF54292; 2Fe-2S ferredoxin-like; 1. DR SUPFAM; SSF46548; alpha-helical ferredoxin; 1. DR PROSITE; PS00197; 2FE2S_FER_1; 1. DR PROSITE; PS51085; 2FE2S_FER_2; 1. DR PROSITE; PS00198; 4FE4S_FER_1; 1. DR PROSITE; PS51379; 4FE4S_FER_2; 1. PE 1: Evidence at protein level; KW 2Fe-2S; 3D-structure; 3Fe-4S; 4Fe-4S; Cell inner membrane; Cell membrane; KW Direct protein sequencing; Electron transport; Iron; Iron-sulfur; Membrane; KW Metal-binding; Oxidoreductase; Reference proteome; Transport; KW Tricarboxylic acid cycle. FT INIT_MET 1 FT /note="Removed" FT /evidence="ECO:0000269|PubMed:6751816" FT CHAIN 2..244 FT /note="Fumarate reductase iron-sulfur subunit" FT /id="PRO_0000158698" FT DOMAIN 16..97 FT /note="2Fe-2S ferredoxin-type" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00465" FT DOMAIN 140..169 FT /note="4Fe-4S ferredoxin-type" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00711" FT BINDING 14 FT /ligand="a menaquinone" FT /ligand_id="ChEBI:CHEBI:16374" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1L0V" FT BINDING 58 FT /ligand="[2Fe-2S] cluster" FT /ligand_id="ChEBI:CHEBI:190135" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 63 FT /ligand="[2Fe-2S] cluster" FT /ligand_id="ChEBI:CHEBI:190135" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 66 FT /ligand="[2Fe-2S] cluster" FT /ligand_id="ChEBI:CHEBI:190135" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 78 FT /ligand="[2Fe-2S] cluster" FT /ligand_id="ChEBI:CHEBI:190135" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 149 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 152 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 155 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 159 FT /ligand="[3Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:21137" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 205 FT /ligand="[3Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:21137" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 211 FT /ligand="[3Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:21137" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 215 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1KF6, ECO:0007744|PDB:1KFY, FT ECO:0007744|PDB:1L0V" FT BINDING 226..229 FT /ligand="a menaquinone" FT /ligand_id="ChEBI:CHEBI:16374" FT /evidence="ECO:0000269|PubMed:10373108, FT ECO:0007744|PDB:1L0V" FT MUTAGEN 58 FT /note="C->S: Affects center 1 (2Fe-2S)." FT /evidence="ECO:0000269|PubMed:2174169" FT MUTAGEN 63 FT /note="C->S: Affects center 1 (2Fe-2S)." FT /evidence="ECO:0000269|PubMed:2174169" FT MUTAGEN 66 FT /note="C->S: Affects center 1 (2Fe-2S)." FT /evidence="ECO:0000269|PubMed:2174169" FT MUTAGEN 78 FT /note="C->S: Affects center 1 (2Fe-2S)." FT /evidence="ECO:0000269|PubMed:2174169" FT STRAND 5..13 FT /evidence="ECO:0007829|PDB:1KF6" FT TURN 16..18 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 23..31 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 37..47 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 59..63 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 67..70 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 73..76 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 77..79 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 82..84 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 89..93 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 99..101 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 103..105 FT /evidence="ECO:0007829|PDB:6AWF" FT HELIX 108..116 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 128..130 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 137..141 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 144..147 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 154..158 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 160..164 FT /evidence="ECO:0007829|PDB:1KF6" FT STRAND 166..168 FT /evidence="ECO:0007829|PDB:3P4S" FT HELIX 171..181 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 190..197 FT /evidence="ECO:0007829|PDB:1KF6" FT TURN 199..201 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 202..204 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 210..214 FT /evidence="ECO:0007829|PDB:1KF6" FT HELIX 221..240 FT /evidence="ECO:0007829|PDB:1KF6" SQ SEQUENCE 244 AA; 27123 MW; AC1D7A73244D7AC0 CRC64; MAEMKNLKIE VVRYNPEVDT APHSAFYEVP YDATTSLLDA LGYIKDNLAP DLSYRWSCRM AICGSCGMMV NNVPKLACKT FLRDYTDGMK VEALANFPIE RDLVVDMTHF IESLEAIKPY IIGNSRTADQ GTNIQTPAQM AKYHQFSGCI NCGLCYAACP QFGLNPEFIG PAAITLAHRY NEDSRDHGKK ERMAQLNSQN GVWSCTFVGY CSEVCPKHVD PAAAIQQGKV ESSKDFLIAT LKPR //