Reviewed,
UniProtKB/Swiss-Prot P0ABR9 (MHPB_ECOLI)
Last modified
June 15, 2010.
Version 40.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and originHide
| Protein names | Recommended name: 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase EC=1.13.11.16 | ||||
| Gene names |
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| Organism | Escherichia coli (strain K12) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 83333 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia |
Protein attributesHide
| Sequence length | 314 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)Hide
| Function | Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6-ketononatrienedioate, respectively. Ref.6 |
| Catalytic activity | 3-(2,3-dihydroxyphenyl)propanoate + O2 = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate. HAMAP MF_01653 2,3-dihydroxicinnamic acid + O2 = 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate. HAMAP MF_01653 |
| Pathway | Aromatic compound metabolism; 3-phenylpropanoate degradation. HAMAP MF_01653 |
| Subunit structure | Homotetramer. Ref.6 |
| Sequence similarities | Belongs to the ligB/mhpB extradiol dioxygenase family. |
| Biophysicochemical properties | Kinetic parameters: KM=26 µM for 2,3-dihydroxyphenylpropionic acid (at 20 degrees Celsius and pH 8) HAMAP MF_01653 KM=36 µM for 2,3-dihydroxycinnamic acid (at 20 degrees Celsius and pH 8) KM=37 µM for methyl-2,3-dihydroxyphenylpropionate (at 20 degrees Celsius and pH 8) KM=90 µM for 3-methylcatechol (at 20 degrees Celsius and pH 8) KM=94 µM for 3-phenethylcatechol (at 20 degrees Celsius and pH 8) KM=154 µM for 3-propylcatechol (at 20 degrees Celsius and pH 8) KM=185 µM for 3-ethylcatechol (at 20 degrees Celsius and pH 8) KM=300 µM for 2,3-dihydroxyphenoxyacetic acid (at 20 degrees Celsius and pH 8) KM=700 µM for catechol (at 20 degrees Celsius and pH 8) |
OntologiesHide
| Keywords | |
|---|---|
| Biological process | Aromatic hydrocarbons catabolism |
| Ligand | Iron |
| Molecular function | Dioxygenase Oxidoreductase |
| Technical term | Complete proteome Direct protein sequencing |
| Gene Ontology (GO) | |
| Biological process | aromatic compound catabolic process Inferred from electronic annotation. Source: HAMAP oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | 2,3-dihydroxy-phenylpropionate 1,2-dioxygenase activity Inferred from electronic annotation. Source: HAMAP 3-carboxyethylcatechol 2,3-dioxygenase activityInferred from electronic annotation. Source: EC ferrous iron bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)Hide
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 314 | 314 | 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase HAMAP MF_01653 | PRO_0000085103 | |||||
Sites | |||||||||
| Active site | 115 | 1 | Proton donor HAMAP MF_01653 | ||||||
| Active site | 179 | 1 | Proton acceptor HAMAP MF_01653 | ||||||
Experimental info | |||||||||
| Mutagenesis | 114 | 1 | D → A: Complete loss of extradiol cleavage activity. Ref.7 | ||||||
| Mutagenesis | 114 | 1 | D → N: Low level of catalytic activity, 600-fold lower than the wild-type enzyme. More than 8000-fold decrease in affinity. Ref.7 | ||||||
| Mutagenesis | 115 | 1 | H → A: Complete loss of extradiol cleavage activity. Ref.7 | ||||||
| Mutagenesis | 115 | 1 | H → Q: Complete loss of activity. Ref.7 | ||||||
| Mutagenesis | 115 | 1 | H → Y: Complete loss of activity. Ref.7 | ||||||
| Mutagenesis | 179 | 1 | H → A: Complete loss of activity. Ref.7 | ||||||
| Mutagenesis | 179 | 1 | H → Q: Complete loss of activity. Ref.7 | ||||||
| Mutagenesis | 179 | 1 | H → Y: Complete loss of activity. Ref.7 | ||||||
| Mutagenesis | 181 | 1 | P → A: More than 2-fold decrease in catalytic activity and 100-fold decrease in affinity. Ref.7 | ||||||
| Mutagenesis | 181 | 1 | P → H: More than 60-fold decrease in catalytic activity and affinity. Ref.7 | ||||||
| Sequence conflict | 138 – 140 | 3 | ING → NKA in BAA13053. Ref.1 | ||||||
| Sequence conflict | 152 | 1 | R → H in BAA13053. Ref.1 | ||||||
| Sequence conflict | 157 | 1 | A → T in BAA13053. Ref.1 | ||||||
SequencesHide
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ReferencesHide
| « Hide 'large scale' references | |
| [1] | "Catechol dioxygenases from Escherichia coli (MhpB) and Alcaligenes eutrophus (MpcI): sequence analysis and biochemical properties of a third family of extradiol dioxygenases." Spence E.L., Kawamukai M., Sanvoisin J., Braven H., Bugg T.D.H. J. Bacteriol. 178:5249-5256(1996) [PubMed: 8752345] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], BIOPHYSICOCHEMICAL PROPERTIES. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
| [2] | "Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12." Ferrandez A., Garcia J.L., Diaz E. J. Bacteriol. 179:2573-2581(1997) [PubMed: 9098055] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12 / CS520. |
| [3] | "Sequence of minutes 4-25 of Escherichia coli." Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W. Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076. |
| [4] | "The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076. |
| [5] | "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
| [6] | "Overproduction, purification and properties of 2,3-dihydroxyphenylpropionate 1,2-dioxygenase from Escherichia coli." Bugg T.D.H. Biochim. Biophys. Acta 1202:258-264(1993) [PubMed: 8399388] [Abstract] Cited for: PROTEIN SEQUENCE OF 1-15, SUBUNIT, FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, COFACTOR. |
| [7] | "Acid-base catalysis in the extradiol catechol dioxygenase reaction mechanism: site-directed mutagenesis of His-115 and His-179 in Escherichia coli 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB)." Mendel S., Arndt A., Bugg T.D.H. Biochemistry 43:13390-13396(2004) [PubMed: 15491145] [Abstract] Cited for: MUTAGENESIS OF ASP-114; HIS-115; HIS-179 AND PRO-181, REACTION MECHANISM. |
Cross-referencesHide
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | D86239 Genomic DNA. Translation: BAA13053.1. Y09555 Genomic DNA. Translation: CAA70748.1. U73857 Genomic DNA. Translation: AAB18072.1. U00096 Genomic DNA. Translation: AAC73451.1. AP009048 Genomic DNA. Translation: BAE76130.1. |
| PIR | D64762. |
| RefSeq | AP_001000.1. NP_414882.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P0ABR9. |
Genome annotation databases | |
| EnsemblBacteria | EBESCT00000003464; EBESCP00000003464; EBESCG00000002840. EBESCT00000017975; EBESCP00000017266; EBESCG00000017031. |
| GeneID | 945047. |
| GenomeReviews | Gene locus JW0339 in contig AP009048_GR. Gene locus b0348 in contig U00096_GR. |
| KEGG | ecj:JW0339. eco:b0348. |
Organism-specific databases | |
| EchoBASE | EB4167. |
| EcoGene | EG20274. mhpB. |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | NOG42398. |
| HOGENOM | HBG565586. |
| OMA | PLNPEWD. |
| ProtClustDB | PRK13370. |
Enzyme and pathway databases | |
| BioCyc | EcoCyc:DHPDIOXYGEN-MONOMER. ECOL168927:B0348-MONOMER. MetaCyc:DHPDIOXYGEN-MONOMER. |
| BRENDA | 1.13.11.16. 246. |
Gene expression databases | |
| Genevestigator | P0ABR9. |
Family and domain databases | |
| HAMAP | MF_01653. MhpB. [Tree] |
| InterPro | IPR004183. Xdiol_dOase_3B. [Graphical view] |
| Pfam | PF02900. LigB. 1 hit. [Graphical view] |
| SUPFAM | SSF53213. Xdiol_dOase_3B. 1 hit. |
| ProtoNet | Search... |
Entry informationHide
| Entry name | MHPB_ECOLI | ||||||||
| Accession | Primary (citable) accession number: P0ABR9 Secondary accession number(s): P54711 Q2MC76 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documentsHide
| Escherichia coli Escherichia coli (strain K12): entries and cross-references to EcoGene |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


