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Protein

Putative dioxygenase subunit alpha YeaW

Gene

yeaW

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Protein has several cofactor binding sites:

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi89 – 891Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation
Metal bindingi91 – 911Iron-sulfur (2Fe-2S); via pros nitrogenPROSITE-ProRule annotation
Metal bindingi109 – 1091Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation
Metal bindingi112 – 1121Iron-sulfur (2Fe-2S); via pros nitrogenPROSITE-ProRule annotation
Metal bindingi211 – 2111IronBy similarity
Metal bindingi216 – 2161IronBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Dioxygenase, Oxidoreductase

Keywords - Ligandi

2Fe-2S, Iron, Iron-sulfur, Metal-binding, NAD

Enzyme and pathway databases

BioCyciEcoCyc:G6988-MONOMER.
ECOL316407:JW5294-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative dioxygenase subunit alpha YeaW (EC:1.14.-.-)
Gene namesi
Name:yeaW
Ordered Locus Names:b1802, JW5294
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13509. yeaW.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 374374Putative dioxygenase subunit alpha YeaWPRO_0000085063Add
BLAST

Proteomic databases

PaxDbiP0ABR7.

Interactioni

Subunit structurei

Probable heterodimer of YeaW and YeaX.

Protein-protein interaction databases

BioGridi4259149. 7 interactions.
STRINGi511145.b1802.

Structurei

3D structure databases

ProteinModelPortaliP0ABR7.
SMRiP0ABR7. Positions 28-226.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 155109RieskePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 Rieske domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105DVW. Bacteria.
COG4638. LUCA.
HOGENOMiHOG000248945.
InParanoidiP0ABR7.
OMAiVEFVICR.
OrthoDBiEOG6W19DT.
PhylomeDBiP0ABR7.

Family and domain databases

Gene3Di2.102.10.10. 1 hit.
3.90.380.10. 1 hit.
InterProiIPR017941. Rieske_2Fe-2S.
IPR015881. Ring-hydroxy_dOase_2Fe2S_BS.
IPR015879. Ring_hydroxy_dOase_asu_C_dom.
IPR001663. Rng_hydr_dOase-A.
[Graphical view]
PfamiPF00355. Rieske. 1 hit.
PF00848. Ring_hydroxyl_A. 1 hit.
[Graphical view]
PRINTSiPR00090. RNGDIOXGNASE.
SUPFAMiSSF50022. SSF50022. 1 hit.
PROSITEiPS51296. RIESKE. 1 hit.
PS00570. RING_HYDROXYL_ALPHA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ABR7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNLSPDFVL PENFCANPQE AWTIPARFYT DQNAFEHEKE NVFAKSWICV
60 70 80 90 100
AHSSELANAN DYVTREIIGE SIVLVRGRDK VLRAFYNVCP HRGHQLLSGE
110 120 130 140 150
GKAKNVITCP YHAWAFKLDG NLAHARNCEN VANFDSDKAQ LVPVRLEEYA
160 170 180 190 200
GFVFINMDPN ATSVEDQLPG LGAKVLEACP EVHDLKLAAR FTTRTPANWK
210 220 230 240 250
NIVDNYLECY HCGPAHPGFS DSVQVDRYWH TMHGNWTLQY GFAKPSEQSF
260 270 280 290 300
KFEEGTDAAF HGFWLWPCTM LNVTPIKGMM TVIYEFPVDS ETTLQNYDIY
310 320 330 340 350
FTNEELTDEQ KSLIEWYRDV FRPEDLRLVE SVQKGLKSRG YRGQGRIMAD
360 370
SSGSGISEHG IAHFHNLLAQ VFKD
Length:374
Mass (Da):42,561
Last modified:November 8, 2005 - v1
Checksum:iBB5386ACA9585606
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74872.1.
AP009048 Genomic DNA. Translation: BAA15597.2.
PIRiB64941.
RefSeqiNP_416316.1. NC_000913.3.
WP_000067822.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74872; AAC74872; b1802.
BAA15597; BAA15597; BAA15597.
GeneIDi946325.
KEGGiecj:JW5294.
eco:b1802.
PATRICi32118921. VBIEscCol129921_1878.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74872.1.
AP009048 Genomic DNA. Translation: BAA15597.2.
PIRiB64941.
RefSeqiNP_416316.1. NC_000913.3.
WP_000067822.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ABR7.
SMRiP0ABR7. Positions 28-226.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259149. 7 interactions.
STRINGi511145.b1802.

Proteomic databases

PaxDbiP0ABR7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74872; AAC74872; b1802.
BAA15597; BAA15597; BAA15597.
GeneIDi946325.
KEGGiecj:JW5294.
eco:b1802.
PATRICi32118921. VBIEscCol129921_1878.

Organism-specific databases

EchoBASEiEB3282.
EcoGeneiEG13509. yeaW.

Phylogenomic databases

eggNOGiENOG4105DVW. Bacteria.
COG4638. LUCA.
HOGENOMiHOG000248945.
InParanoidiP0ABR7.
OMAiVEFVICR.
OrthoDBiEOG6W19DT.
PhylomeDBiP0ABR7.

Enzyme and pathway databases

BioCyciEcoCyc:G6988-MONOMER.
ECOL316407:JW5294-MONOMER.

Miscellaneous databases

PROiP0ABR7.

Family and domain databases

Gene3Di2.102.10.10. 1 hit.
3.90.380.10. 1 hit.
InterProiIPR017941. Rieske_2Fe-2S.
IPR015881. Ring-hydroxy_dOase_2Fe2S_BS.
IPR015879. Ring_hydroxy_dOase_asu_C_dom.
IPR001663. Rng_hydr_dOase-A.
[Graphical view]
PfamiPF00355. Rieske. 1 hit.
PF00848. Ring_hydroxyl_A. 1 hit.
[Graphical view]
PRINTSiPR00090. RNGDIOXGNASE.
SUPFAMiSSF50022. SSF50022. 1 hit.
PROSITEiPS51296. RIESKE. 1 hit.
PS00570. RING_HYDROXYL_ALPHA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYEAW_ECOLI
AccessioniPrimary (citable) accession number: P0ABR7
Secondary accession number(s): P76253
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: November 8, 2005
Last modified: January 20, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.