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Protein

Protein DedA

Gene

dedA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG10216-MONOMER

Protein family/group databases

TCDBi9.B.27.2.3 the deda or ydjx-z (deda) family

Names & Taxonomyi

Protein namesi
Recommended name:
Protein DedA
Alternative name(s):
Protein DSG-1
Gene namesi
Name:dedA
Ordered Locus Names:b2317, JW2314
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10216 dedA

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 24PeriplasmicSequence analysisAdd BLAST24
Transmembranei25 – 45HelicalSequence analysisAdd BLAST21
Transmembranei46 – 66HelicalSequence analysisAdd BLAST21
Topological domaini67 – 72PeriplasmicSequence analysis6
Transmembranei73 – 93HelicalSequence analysisAdd BLAST21
Topological domaini94 – 160CytoplasmicSequence analysisAdd BLAST67
Transmembranei161 – 181HelicalSequence analysisAdd BLAST21
Topological domaini182 – 187PeriplasmicSequence analysis6
Transmembranei188 – 208HelicalSequence analysisAdd BLAST21
Topological domaini209 – 219CytoplasmicSequence analysisAdd BLAST11

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001614061 – 219Protein DedAAdd BLAST219

Proteomic databases

PaxDbiP0ABP6
PRIDEiP0ABP6

Interactioni

Protein-protein interaction databases

BioGridi4261363, 9 interactors
DIPiDIP-48027N
IntActiP0ABP6, 1 interactor
STRINGi316385.ECDH10B_2479

Structurei

3D structure databases

ProteinModelPortaliP0ABP6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DedA family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DQR Bacteria
COG0586 LUCA
HOGENOMiHOG000105368
InParanoidiP0ABP6
KOiK03975
OMAiGGSKMHY
PhylomeDBiP0ABP6

Family and domain databases

InterProiView protein in InterPro
IPR032818 DedA
IPR032816 SNARE_assoc
PANTHERiPTHR30353 PTHR30353, 1 hit
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit

Sequencei

Sequence statusi: Complete.

P0ABP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLIYFLIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP
60 70 80 90 100
GDSLLFVAGA LASLETNDLN VHMMVVLMLI AAIVGDAVNY TIGRLFGEKL
110 120 130 140 150
FSNPNSKIFR RSYLDKTHQF YEKHGGKTII LARFVPIVRT FAPFVAGMGH
160 170 180 190 200
MSYRHFAAYN VIGALLWVLL FTYAGYFFGT IPMVQDNLKL LIVGIIVVSI
210
LPGVIEIIRH KRAAARAAK
Length:219
Mass (Da):24,510
Last modified:November 8, 2005 - v1
Checksum:i37F38ABAB8678C20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M68934 Genomic DNA Translation: AAA23964.1
U00096 Genomic DNA Translation: AAC75377.1
AP009048 Genomic DNA Translation: BAA16174.1
M15543 Genomic DNA Translation: AAA24314.1
X02743 Genomic DNA Translation: CAA26523.1
S53037 mRNA Translation: AAB24893.1
PIRiB29803 XMECAD
RefSeqiNP_416820.1, NC_000913.3
WP_000364335.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75377; AAC75377; b2317
BAA16174; BAA16174; BAA16174
GeneIDi946798
KEGGiecj:JW2314
eco:b2317
PATRICifig|1411691.4.peg.4417

Similar proteinsi

Entry informationi

Entry nameiDEDA_ECOLI
AccessioniPrimary (citable) accession number: P0ABP6
Secondary accession number(s): P09548
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: November 8, 2005
Last modified: March 28, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

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