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P0ABF4

- EUTM_ECOLI

UniProt

P0ABF4 - EUTM_ECOLI

Protein

Ethanolamine utilization protein EutM

Gene

eutM

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place.

    Pathwayi

    GO - Molecular functioni

    1. structural molecule activity Source: EcoCyc

    GO - Biological processi

    1. ethanolamine catabolic process Source: UniProtKB-UniPathway

    Enzyme and pathway databases

    BioCyciEcoCyc:G7287-MONOMER.
    ECOL316407:JW2441-MONOMER.
    UniPathwayiUPA00560.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ethanolamine utilization protein EutM
    Gene namesi
    Name:eutM
    Synonyms:cchA, yffZ
    Ordered Locus Names:b2457, JW2441
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG14187. eutM.

    Subcellular locationi

    GO - Cellular componenti

    1. ethanolamine degradation polyhedral organelle Source: EcoCyc

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 9772Ethanolamine utilization protein EutMPRO_0000004786Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP0ABF4.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-9537N.
    IntActiP0ABF4. 2 interactions.
    STRINGi511145.b2457.

    Structurei

    Secondary structure

    1
    97
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi3 – 119
    Helixi12 – 2514
    Beta strandi26 – 3510
    Beta strandi40 – 478
    Helixi49 – 6618
    Beta strandi69 – 779
    Helixi81 – 855
    Beta strandi90 – 923
    Turni94 – 974

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3I6PX-ray2.10A/B/C/D/E/F1-97[»]
    3MPWX-ray2.70A/B/C/D/E/F/G/H/I/J/K/L1-97[»]
    3MPYX-ray2.00A1-97[»]
    ProteinModelPortaliP0ABF4.
    SMRiP0ABF4. Positions 2-97.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP0ABF4.

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG4577.
    HOGENOMiHOG000286836.
    KOiK04027.
    OMAiHMEVESI.
    OrthoDBiEOG6ZH2H4.
    PhylomeDBiP0ABF4.

    Family and domain databases

    InterProiIPR020808. Bact_microcomp_CS.
    IPR000249. Microcompartment_bac.
    [Graphical view]
    PfamiPF00936. BMC. 1 hit.
    [Graphical view]
    SMARTiSM00877. BMC. 1 hit.
    [Graphical view]
    PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P0ABF4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEALGMIETR GLVALIEASD AMVKAARVKL VGVKQIGGGL CTAMVRGDVA   50
    ACKAATDAGA AAAQRIGELV SVHVIPRPHG DLEEVFPIGL KGDSSNL 97
    Length:97
    Mass (Da):9,866
    Last modified:October 25, 2005 - v1
    Checksum:i0A4170FD8ABB8CF8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75510.2.
    AP009048 Genomic DNA. Translation: BAA16335.2.
    RefSeqiNP_416952.2. NC_000913.3.
    YP_490684.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75510; AAC75510; b2457.
    BAA16335; BAA16335; BAA16335.
    GeneIDi12931932.
    946942.
    KEGGiecj:Y75_p2409.
    eco:b2457.
    PATRICi32120297. VBIEscCol129921_2551.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75510.2 .
    AP009048 Genomic DNA. Translation: BAA16335.2 .
    RefSeqi NP_416952.2. NC_000913.3.
    YP_490684.1. NC_007779.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3I6P X-ray 2.10 A/B/C/D/E/F 1-97 [» ]
    3MPW X-ray 2.70 A/B/C/D/E/F/G/H/I/J/K/L 1-97 [» ]
    3MPY X-ray 2.00 A 1-97 [» ]
    ProteinModelPortali P0ABF4.
    SMRi P0ABF4. Positions 2-97.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-9537N.
    IntActi P0ABF4. 2 interactions.
    STRINGi 511145.b2457.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75510 ; AAC75510 ; b2457 .
    BAA16335 ; BAA16335 ; BAA16335 .
    GeneIDi 12931932.
    946942.
    KEGGi ecj:Y75_p2409.
    eco:b2457.
    PATRICi 32120297. VBIEscCol129921_2551.

    Organism-specific databases

    EchoBASEi EB3939.
    EcoGenei EG14187. eutM.

    Phylogenomic databases

    eggNOGi COG4577.
    HOGENOMi HOG000286836.
    KOi K04027.
    OMAi HMEVESI.
    OrthoDBi EOG6ZH2H4.
    PhylomeDBi P0ABF4.

    Enzyme and pathway databases

    UniPathwayi UPA00560 .
    BioCyci EcoCyc:G7287-MONOMER.
    ECOL316407:JW2441-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P0ABF4.
    PROi P0ABF4.

    Gene expression databases

    Genevestigatori P0ABF4.

    Family and domain databases

    InterProi IPR020808. Bact_microcomp_CS.
    IPR000249. Microcompartment_bac.
    [Graphical view ]
    Pfami PF00936. BMC. 1 hit.
    [Graphical view ]
    SMARTi SM00877. BMC. 1 hit.
    [Graphical view ]
    PROSITEi PS01139. BACT_MICROCOMP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
      Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
      , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
      DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

    Entry informationi

    Entry nameiEUTM_ECOLI
    AccessioniPrimary (citable) accession number: P0ABF4
    Secondary accession number(s): P77606
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 25, 2005
    Last sequence update: October 25, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    4. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3