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P0ABF4

- EUTM_ECOLI

UniProt

P0ABF4 - EUTM_ECOLI

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Protein
Ethanolamine utilization protein EutM
Gene
eutM, cchA, yffZ, b2457, JW2441
Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place.

Pathwayi

GO - Molecular functioni

  1. structural molecule activity Source: EcoCyc

GO - Biological processi

  1. ethanolamine catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7287-MONOMER.
ECOL316407:JW2441-MONOMER.
UniPathwayiUPA00560.

Names & Taxonomyi

Protein namesi
Recommended name:
Ethanolamine utilization protein EutM
Gene namesi
Name:eutM
Synonyms:cchA, yffZ
Ordered Locus Names:b2457, JW2441
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG14187. eutM.

Subcellular locationi

GO - Cellular componenti

  1. ethanolamine degradation polyhedral organelle Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 Reviewed prediction
Add
BLAST
Chaini26 – 9772Ethanolamine utilization protein EutM
PRO_0000004786Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP0ABF4.

Interactioni

Protein-protein interaction databases

DIPiDIP-9537N.
IntActiP0ABF4. 2 interactions.
STRINGi511145.b2457.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 119
Helixi12 – 2514
Beta strandi26 – 3510
Beta strandi40 – 478
Helixi49 – 6618
Beta strandi69 – 779
Helixi81 – 855
Beta strandi90 – 923
Turni94 – 974

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3I6PX-ray2.10A/B/C/D/E/F1-97[»]
3MPWX-ray2.70A/B/C/D/E/F/G/H/I/J/K/L1-97[»]
3MPYX-ray2.00A1-97[»]
ProteinModelPortaliP0ABF4.
SMRiP0ABF4. Positions 2-97.

Miscellaneous databases

EvolutionaryTraceiP0ABF4.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
KOiK04027.
OMAiHMEVESI.
OrthoDBiEOG6ZH2H4.
PhylomeDBiP0ABF4.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0ABF4-1 [UniParc]FASTAAdd to Basket

« Hide

MEALGMIETR GLVALIEASD AMVKAARVKL VGVKQIGGGL CTAMVRGDVA   50
ACKAATDAGA AAAQRIGELV SVHVIPRPHG DLEEVFPIGL KGDSSNL 97
Length:97
Mass (Da):9,866
Last modified:October 25, 2005 - v1
Checksum:i0A4170FD8ABB8CF8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. Translation: AAC75510.2.
AP009048 Genomic DNA. Translation: BAA16335.2.
RefSeqiNP_416952.2. NC_000913.3.
YP_490684.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75510; AAC75510; b2457.
BAA16335; BAA16335; BAA16335.
GeneIDi12931932.
946942.
KEGGiecj:Y75_p2409.
eco:b2457.
PATRICi32120297. VBIEscCol129921_2551.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. Translation: AAC75510.2 .
AP009048 Genomic DNA. Translation: BAA16335.2 .
RefSeqi NP_416952.2. NC_000913.3.
YP_490684.1. NC_007779.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3I6P X-ray 2.10 A/B/C/D/E/F 1-97 [» ]
3MPW X-ray 2.70 A/B/C/D/E/F/G/H/I/J/K/L 1-97 [» ]
3MPY X-ray 2.00 A 1-97 [» ]
ProteinModelPortali P0ABF4.
SMRi P0ABF4. Positions 2-97.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-9537N.
IntActi P0ABF4. 2 interactions.
STRINGi 511145.b2457.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75510 ; AAC75510 ; b2457 .
BAA16335 ; BAA16335 ; BAA16335 .
GeneIDi 12931932.
946942.
KEGGi ecj:Y75_p2409.
eco:b2457.
PATRICi 32120297. VBIEscCol129921_2551.

Organism-specific databases

EchoBASEi EB3939.
EcoGenei EG14187. eutM.

Phylogenomic databases

eggNOGi COG4577.
HOGENOMi HOG000286836.
KOi K04027.
OMAi HMEVESI.
OrthoDBi EOG6ZH2H4.
PhylomeDBi P0ABF4.

Enzyme and pathway databases

UniPathwayi UPA00560 .
BioCyci EcoCyc:G7287-MONOMER.
ECOL316407:JW2441-MONOMER.

Miscellaneous databases

EvolutionaryTracei P0ABF4.
PROi P0ABF4.

Gene expression databases

Genevestigatori P0ABF4.

Family and domain databases

InterProi IPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view ]
Pfami PF00936. BMC. 1 hit.
[Graphical view ]
SMARTi SM00877. BMC. 1 hit.
[Graphical view ]
PROSITEi PS01139. BACT_MICROCOMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
    Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
    , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
    DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiEUTM_ECOLI
AccessioniPrimary (citable) accession number: P0ABF4
Secondary accession number(s): P77606
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2005
Last sequence update: October 25, 2005
Last modified: May 14, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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