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Protein

Uncharacterized protein YchH

Gene

ychH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • cellular response to cadmium ion Source: EcoCyc
  • cellular response to hydrogen peroxide Source: EcoCyc
  • single-species biofilm formation on inanimate substrate Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11533-MONOMER.
ECOL316407:JW1196-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YchH
Gene namesi
Name:ychH
Ordered Locus Names:b1205, JW1196
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11533. ychH.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292Uncharacterized protein YchHPRO_0000168867Add
BLAST

Proteomic databases

PaxDbiP0AB49.

Interactioni

Protein-protein interaction databases

BioGridi4260109. 17 interactions.
IntActiP0AB49. 1 interaction.
STRINGi511145.b1205.

Structurei

3D structure databases

ProteinModelPortaliP0AB49.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105MGX. Bacteria.
ENOG4111VC3. LUCA.
HOGENOMiHOG000119757.
OMAiKRCRRDQ.
OrthoDBiEOG6GR3F7.

Family and domain databases

InterProiIPR019698. DUF2583.
[Graphical view]
PfamiPF10762. DUF2583. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AB49-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRKNASLLG NVLMGLGLVV MVVGVGYSIL NQLPQFNMPQ YFAHGAVLSI
60 70 80 90
FVGAILWLAG ARVGGHEQVC DRYWWVRHYD KRCRRSDNRR HS
Length:92
Mass (Da):10,486
Last modified:October 11, 2005 - v1
Checksum:i8F75344F0C72525C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X61941 Genomic DNA. Translation: CAA43947.1.
U00096 Genomic DNA. Translation: AAC74289.1.
AP009048 Genomic DNA. Translation: BAA36063.1.
PIRiB64867.
RefSeqiNP_415723.1. NC_000913.3.
WP_000823885.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74289; AAC74289; b1205.
BAA36063; BAA36063; BAA36063.
GeneIDi945762.
KEGGiecj:JW1196.
eco:b1205.
PATRICi32117662. VBIEscCol129921_1253.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X61941 Genomic DNA. Translation: CAA43947.1.
U00096 Genomic DNA. Translation: AAC74289.1.
AP009048 Genomic DNA. Translation: BAA36063.1.
PIRiB64867.
RefSeqiNP_415723.1. NC_000913.3.
WP_000823885.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AB49.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260109. 17 interactions.
IntActiP0AB49. 1 interaction.
STRINGi511145.b1205.

Proteomic databases

PaxDbiP0AB49.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74289; AAC74289; b1205.
BAA36063; BAA36063; BAA36063.
GeneIDi945762.
KEGGiecj:JW1196.
eco:b1205.
PATRICi32117662. VBIEscCol129921_1253.

Organism-specific databases

EchoBASEiEB1495.
EcoGeneiEG11533. ychH.

Phylogenomic databases

eggNOGiENOG4105MGX. Bacteria.
ENOG4111VC3. LUCA.
HOGENOMiHOG000119757.
OMAiKRCRRDQ.
OrthoDBiEOG6GR3F7.

Enzyme and pathway databases

BioCyciEcoCyc:EG11533-MONOMER.
ECOL316407:JW1196-MONOMER.

Miscellaneous databases

PROiP0AB49.

Family and domain databases

InterProiIPR019698. DUF2583.
[Graphical view]
PfamiPF10762. DUF2583. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Peptidyl-tRNA hydrolase is involved in lambda inhibition of host protein synthesis."
    Garcia-Villegas M.R., de la Vega F.M., Galindo J.M., Segura M., Buckingham R.H., Guarneros G.
    EMBO J. 10:3549-3555(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Open reading frames flanking the peptidyl-tRNA hydrolase-encoding gene of Escherichia coli."
    Galindo J.M., de la Vega F.M., Guarneros G.
    Gene 151:153-156(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION.
    Strain: K12.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  5. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYCHH_ECOLI
AccessioniPrimary (citable) accession number: P0AB49
Secondary accession number(s): P31807
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 20, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.