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Protein

Uncharacterized protein YceD

Gene

yceD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11119-MONOMER.
ECOL316407:JW1074-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YceD
Alternative name(s):
G30K
Gene namesi
Name:yceD
Synonyms:g30k
Ordered Locus Names:b1088, JW1074
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11119. yceD.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 173173Uncharacterized protein YceDPRO_0000168811Add
BLAST

Proteomic databases

PaxDbiP0AB28.
PRIDEiP0AB28.

Interactioni

Protein-protein interaction databases

BioGridi4261028. 13 interactions.
IntActiP0AB28. 11 interactions.
STRINGi511145.b1088.

Structurei

3D structure databases

ProteinModelPortaliP0AB28.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_0159.Curated

Phylogenomic databases

eggNOGiENOG4105FCQ. Bacteria.
COG1399. LUCA.
HOGENOMiHOG000258050.
InParanoidiP0AB28.
KOiK07040.
OMAiTLLCQRC.
PhylomeDBiP0AB28.

Family and domain databases

InterProiIPR003772. DUF177.
[Graphical view]
PfamiPF02620. DUF177. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AB28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKVKLPLTL DPVRTAQKRL DYQGIYTPDQ VERVAESVVS VDSDVECSMS
60 70 80 90 100
FAIDNQRLAV LNGDAKVTVT LECQRCGKPF THQVYTTYCF SPVRSDEQAE
110 120 130 140 150
ALPEAYEPIE VNEFGEIDLL AMVEDEIILA LPVVPVHDSE HCEVSEADMV
160 170
FGELPEEAQK PNPFAVLASL KRK
Length:173
Mass (Da):19,315
Last modified:October 11, 2005 - v1
Checksum:iB9A75B15F13BF6C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M29698 Genomic DNA. Translation: AAA24574.1.
U00096 Genomic DNA. Translation: AAC74172.1.
AP009048 Genomic DNA. Translation: BAA35896.1.
M96791 Genomic DNA. Translation: AAA23830.1.
PIRiJV0047.
RefSeqiNP_415606.1. NC_000913.3.
WP_001174481.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74172; AAC74172; b1088.
BAA35896; BAA35896; BAA35896.
GeneIDi945650.
KEGGiecj:JW1074.
eco:b1088.
PATRICi32117417. VBIEscCol129921_1131.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M29698 Genomic DNA. Translation: AAA24574.1.
U00096 Genomic DNA. Translation: AAC74172.1.
AP009048 Genomic DNA. Translation: BAA35896.1.
M96791 Genomic DNA. Translation: AAA23830.1.
PIRiJV0047.
RefSeqiNP_415606.1. NC_000913.3.
WP_001174481.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AB28.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261028. 13 interactions.
IntActiP0AB28. 11 interactions.
STRINGi511145.b1088.

Proteomic databases

PaxDbiP0AB28.
PRIDEiP0AB28.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74172; AAC74172; b1088.
BAA35896; BAA35896; BAA35896.
GeneIDi945650.
KEGGiecj:JW1074.
eco:b1088.
PATRICi32117417. VBIEscCol129921_1131.

Organism-specific databases

EchoBASEiEB1109.
EcoGeneiEG11119. yceD.

Phylogenomic databases

eggNOGiENOG4105FCQ. Bacteria.
COG1399. LUCA.
HOGENOMiHOG000258050.
InParanoidiP0AB28.
KOiK07040.
OMAiTLLCQRC.
PhylomeDBiP0AB28.

Enzyme and pathway databases

BioCyciEcoCyc:EG11119-MONOMER.
ECOL316407:JW1074-MONOMER.

Miscellaneous databases

PROiP0AB28.

Family and domain databases

InterProiIPR003772. DUF177.
[Graphical view]
PfamiPF02620. DUF177. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCED_ECOLI
AccessioniPrimary (citable) accession number: P0AB28
Secondary accession number(s): P14189
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.