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Protein

Uncharacterized lipoprotein YceB

Gene

yceB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11117-MONOMER.
ECOL316407:JW1050-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YceB
Gene namesi
Name:yceB
Ordered Locus Names:b1063, JW1050
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11117. yceB.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818PROSITE-ProRule annotationAdd
BLAST
Chaini19 – 186168Uncharacterized lipoprotein YceBPRO_0000013822Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi19 – 191N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi19 – 191S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP0AB26.

2D gel databases

SWISS-2DPAGEP0AB26.

Interactioni

Protein-protein interaction databases

BioGridi4261688. 119 interactions.
IntActiP0AB26. 1 interaction.
STRINGi511145.b1063.

Structurei

Secondary structure

1
186
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi22 – 287Combined sources
Helixi29 – 3911Combined sources
Beta strandi43 – 486Combined sources
Turni49 – 513Combined sources
Beta strandi52 – 6918Combined sources
Beta strandi73 – 8513Combined sources
Beta strandi88 – 10518Combined sources
Turni106 – 1094Combined sources
Beta strandi110 – 12516Combined sources
Helixi127 – 14923Combined sources
Beta strandi152 – 1543Combined sources
Beta strandi157 – 1593Combined sources
Helixi161 – 1699Combined sources
Beta strandi174 – 1763Combined sources
Beta strandi179 – 1835Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3L6IX-ray2.01A/B20-186[»]
ProteinModelPortaliP0AB26.
SMRiP0AB26. Positions 20-185.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0AB26.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105F3T. Bacteria.
ENOG410XXD0. LUCA.
HOGENOMiHOG000278581.
OMAiELVIPFT.
OrthoDBiEOG61CM48.

Family and domain databases

InterProiIPR010835. DUF1439.
[Graphical view]
PfamiPF07273. DUF1439. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AB26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKFLFAAAL IVSGLLVGCN QLTQYTITEQ EINQSLAKHN NFSKDIGLPG
60 70 80 90 100
VADAHIVLTN LTSQIGREEP NKVTLTGDAN LDMNSLFGSQ KATMKLKLKA
110 120 130 140 150
LPVFDKEKGA IFLKEMEVVD ATVQPEKMQT VMQTLLPYLN QALRNYFNQQ
160 170 180
PAYVLREDGS QGEAMAKKLA KGIEVKPGEI VIPFTD
Length:186
Mass (Da):20,500
Last modified:October 11, 2005 - v1
Checksum:iEEA127007B2ACA3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04469 Genomic DNA. Translation: CAA28156.1.
U00096 Genomic DNA. Translation: AAC74147.1.
AP009048 Genomic DNA. Translation: BAA35871.1.
PIRiB25008. QQECP5.
RefSeqiNP_415581.1. NC_000913.3.
WP_001295443.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74147; AAC74147; b1063.
BAA35871; BAA35871; BAA35871.
GeneIDi947377.
KEGGiecj:JW1050.
eco:b1063.
PATRICi32117365. VBIEscCol129921_1105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04469 Genomic DNA. Translation: CAA28156.1.
U00096 Genomic DNA. Translation: AAC74147.1.
AP009048 Genomic DNA. Translation: BAA35871.1.
PIRiB25008. QQECP5.
RefSeqiNP_415581.1. NC_000913.3.
WP_001295443.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3L6IX-ray2.01A/B20-186[»]
ProteinModelPortaliP0AB26.
SMRiP0AB26. Positions 20-185.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261688. 119 interactions.
IntActiP0AB26. 1 interaction.
STRINGi511145.b1063.

2D gel databases

SWISS-2DPAGEP0AB26.

Proteomic databases

PaxDbiP0AB26.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74147; AAC74147; b1063.
BAA35871; BAA35871; BAA35871.
GeneIDi947377.
KEGGiecj:JW1050.
eco:b1063.
PATRICi32117365. VBIEscCol129921_1105.

Organism-specific databases

EchoBASEiEB1107.
EcoGeneiEG11117. yceB.

Phylogenomic databases

eggNOGiENOG4105F3T. Bacteria.
ENOG410XXD0. LUCA.
HOGENOMiHOG000278581.
OMAiELVIPFT.
OrthoDBiEOG61CM48.

Enzyme and pathway databases

BioCyciEcoCyc:EG11117-MONOMER.
ECOL316407:JW1050-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP0AB26.
PROiP0AB26.

Family and domain databases

InterProiIPR010835. DUF1439.
[Graphical view]
PfamiPF07273. DUF1439. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence of the structural gene for dihydroorotase of Escherichia coli K12."
    Baeckstroem D., Sjoeberg R.-M., Lundberg L.G.
    Eur. J. Biochem. 160:77-82(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYCEB_ECOLI
AccessioniPrimary (citable) accession number: P0AB26
Secondary accession number(s): P09995
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 20, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.