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Protein

Uncharacterized lipoprotein YceB

Gene

yceB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11117-MONOMER.
ECOL316407:JW1050-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YceB
Gene namesi
Name:yceB
Ordered Locus Names:b1063, JW1050
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11117. yceB.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18PROSITE-ProRule annotationAdd BLAST18
ChainiPRO_000001382219 – 186Uncharacterized lipoprotein YceBAdd BLAST168

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi19N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi19S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP0AB26.
PRIDEiP0AB26.

2D gel databases

SWISS-2DPAGEP0AB26.

Interactioni

Protein-protein interaction databases

BioGridi4261688. 119 interactors.
IntActiP0AB26. 1 interactor.
STRINGi511145.b1063.

Structurei

Secondary structure

1186
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi22 – 28Combined sources7
Helixi29 – 39Combined sources11
Beta strandi43 – 48Combined sources6
Turni49 – 51Combined sources3
Beta strandi52 – 69Combined sources18
Beta strandi73 – 85Combined sources13
Beta strandi88 – 105Combined sources18
Turni106 – 109Combined sources4
Beta strandi110 – 125Combined sources16
Helixi127 – 149Combined sources23
Beta strandi152 – 154Combined sources3
Beta strandi157 – 159Combined sources3
Helixi161 – 169Combined sources9
Beta strandi174 – 176Combined sources3
Beta strandi179 – 183Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3L6IX-ray2.01A/B20-186[»]
ProteinModelPortaliP0AB26.
SMRiP0AB26.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0AB26.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105F3T. Bacteria.
ENOG410XXD0. LUCA.
HOGENOMiHOG000278581.
OMAiELVIPFT.

Family and domain databases

InterProiIPR010835. DUF1439.
[Graphical view]
PfamiPF07273. DUF1439. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AB26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKFLFAAAL IVSGLLVGCN QLTQYTITEQ EINQSLAKHN NFSKDIGLPG
60 70 80 90 100
VADAHIVLTN LTSQIGREEP NKVTLTGDAN LDMNSLFGSQ KATMKLKLKA
110 120 130 140 150
LPVFDKEKGA IFLKEMEVVD ATVQPEKMQT VMQTLLPYLN QALRNYFNQQ
160 170 180
PAYVLREDGS QGEAMAKKLA KGIEVKPGEI VIPFTD
Length:186
Mass (Da):20,500
Last modified:October 11, 2005 - v1
Checksum:iEEA127007B2ACA3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04469 Genomic DNA. Translation: CAA28156.1.
U00096 Genomic DNA. Translation: AAC74147.1.
AP009048 Genomic DNA. Translation: BAA35871.1.
PIRiB25008. QQECP5.
RefSeqiNP_415581.1. NC_000913.3.
WP_001295443.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74147; AAC74147; b1063.
BAA35871; BAA35871; BAA35871.
GeneIDi947377.
KEGGiecj:JW1050.
eco:b1063.
PATRICi32117365. VBIEscCol129921_1105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X04469 Genomic DNA. Translation: CAA28156.1.
U00096 Genomic DNA. Translation: AAC74147.1.
AP009048 Genomic DNA. Translation: BAA35871.1.
PIRiB25008. QQECP5.
RefSeqiNP_415581.1. NC_000913.3.
WP_001295443.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3L6IX-ray2.01A/B20-186[»]
ProteinModelPortaliP0AB26.
SMRiP0AB26.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261688. 119 interactors.
IntActiP0AB26. 1 interactor.
STRINGi511145.b1063.

2D gel databases

SWISS-2DPAGEP0AB26.

Proteomic databases

PaxDbiP0AB26.
PRIDEiP0AB26.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74147; AAC74147; b1063.
BAA35871; BAA35871; BAA35871.
GeneIDi947377.
KEGGiecj:JW1050.
eco:b1063.
PATRICi32117365. VBIEscCol129921_1105.

Organism-specific databases

EchoBASEiEB1107.
EcoGeneiEG11117. yceB.

Phylogenomic databases

eggNOGiENOG4105F3T. Bacteria.
ENOG410XXD0. LUCA.
HOGENOMiHOG000278581.
OMAiELVIPFT.

Enzyme and pathway databases

BioCyciEcoCyc:EG11117-MONOMER.
ECOL316407:JW1050-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP0AB26.
PROiP0AB26.

Family and domain databases

InterProiIPR010835. DUF1439.
[Graphical view]
PfamiPF07273. DUF1439. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCEB_ECOLI
AccessioniPrimary (citable) accession number: P0AB26
Secondary accession number(s): P09995
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.