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P0AB14 (YCCJ_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YccJ
Gene names
Name:yccJ
Ordered Locus Names:b1003, JW0988
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length75 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical termComplete proteome
Direct protein sequencing
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.5
Chain2 – 7574Uncharacterized protein YccJ
PRO_0000168785

Sequences

Sequence LengthMass (Da)Tools
P0AB14 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 6F7108422ED519A5

FASTA758,524
        10         20         30         40         50         60 
MPTQEAKAHH VGEWASLRNT SPEIAEAIFE VAGYDEKMAE KIWEEGSDEV LVKAFAKTDK 

        70 
DSLFWGEQTI ERKNV 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence and transcriptional analysis of the Escherichia coli agp gene encoding periplasmic acid glucose-1-phosphatase."
Pradel E., Marck C., Boquet P.L.
J. Bacteriol. 172:802-807(1990) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: K12.
[2]"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map."
Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. expand/collapse author list , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T.
DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[4]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]"Small genes/gene-products in Escherichia coli K-12."
Wasinger V.C., Humphery-Smith I.
FEMS Microbiol. Lett. 169:375-382(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-11.
Strain: K12.
[6]"Detection of new genes in a bacterial genome using Markov models for three gene classes."
Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.
Nucleic Acids Res. 23:3554-3562(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M33807 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74088.1.
AP009048 Genomic DNA. Translation: BAA35770.1.
PIRA64842.
RefSeqNP_415523.1. NC_000913.3.
YP_489276.1. NC_007779.1.

3D structure databases

ProteinModelPortalP0AB14.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-47912N.
IntActP0AB14. 6 interactions.
STRING511145.b1003.

Proteomic databases

PaxDbP0AB14.
PRIDEP0AB14.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC74088; AAC74088; b1003.
BAA35770; BAA35770; BAA35770.
GeneID12930558.
948930.
KEGGecj:Y75_p0976.
eco:b1003.
PATRIC32117231. VBIEscCol129921_1039.

Organism-specific databases

EchoBASEEB2565.
EcoGeneEG12703. yccJ.

Phylogenomic databases

eggNOGNOG13465.
HOGENOMHOG000267892.
OMAVANYDEK.
OrthoDBEOG62K218.
ProtClustDBPRK10174.

Enzyme and pathway databases

BioCycEcoCyc:EG12703-MONOMER.
ECOL316407:JW0988-MONOMER.

Gene expression databases

GenevestigatorP0AB14.

Family and domain databases

InterProIPR025600. YccJ.
[Graphical view]
PfamPF13993. YccJ. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP0AB14.

Entry information

Entry nameYCCJ_ECOLI
AccessionPrimary (citable) accession number: P0AB14
Secondary accession number(s): P46131
Entry history
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 19, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene