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Protein

Uncharacterized protein YccJ

Gene

yccJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12703-MONOMER.
ECOL316407:JW0988-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YccJ
Gene namesi
Name:yccJ
Ordered Locus Names:b1003, JW0988
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318 Componenti: Chromosome UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12703. yccJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 7574Uncharacterized protein YccJPRO_0000168785Add
BLAST

Proteomic databases

PaxDbiP0AB14.
PRIDEiP0AB14.

Interactioni

Protein-protein interaction databases

DIPiDIP-47912N.
IntActiP0AB14. 6 interactions.
STRINGi511145.b1003.

Structurei

3D structure databases

ProteinModelPortaliP0AB14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG13465.
HOGENOMiHOG000267892.
OMAiQSKAHHV.
OrthoDBiEOG62K218.

Family and domain databases

InterProiIPR025600. YccJ.
[Graphical view]
PfamiPF13993. YccJ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AB14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTQEAKAHH VGEWASLRNT SPEIAEAIFE VAGYDEKMAE KIWEEGSDEV
60 70
LVKAFAKTDK DSLFWGEQTI ERKNV
Length:75
Mass (Da):8,524
Last modified:October 11, 2005 - v1
Checksum:i6F7108422ED519A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33807 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74088.1.
AP009048 Genomic DNA. Translation: BAA35770.1.
PIRiA64842.
RefSeqiNP_415523.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74088; AAC74088; b1003.
BAA35770; BAA35770; BAA35770.
GeneIDi948930.
KEGGiecj:Y75_p0976.
eco:b1003.
PATRICi32117231. VBIEscCol129921_1039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33807 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74088.1.
AP009048 Genomic DNA. Translation: BAA35770.1.
PIRiA64842.
RefSeqiNP_415523.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP0AB14.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-47912N.
IntActiP0AB14. 6 interactions.
STRINGi511145.b1003.

Proteomic databases

PaxDbiP0AB14.
PRIDEiP0AB14.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74088; AAC74088; b1003.
BAA35770; BAA35770; BAA35770.
GeneIDi948930.
KEGGiecj:Y75_p0976.
eco:b1003.
PATRICi32117231. VBIEscCol129921_1039.

Organism-specific databases

EchoBASEiEB2565.
EcoGeneiEG12703. yccJ.

Phylogenomic databases

eggNOGiNOG13465.
HOGENOMiHOG000267892.
OMAiQSKAHHV.
OrthoDBiEOG62K218.

Enzyme and pathway databases

BioCyciEcoCyc:EG12703-MONOMER.
ECOL316407:JW0988-MONOMER.

Miscellaneous databases

PROiP0AB14.

Family and domain databases

InterProiIPR025600. YccJ.
[Graphical view]
PfamiPF13993. YccJ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and transcriptional analysis of the Escherichia coli agp gene encoding periplasmic acid glucose-1-phosphatase."
    Pradel E., Marck C., Boquet P.L.
    J. Bacteriol. 172:802-807(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Small genes/gene-products in Escherichia coli K-12."
    Wasinger V.C., Humphery-Smith I.
    FEMS Microbiol. Lett. 169:375-382(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-11.
    Strain: K12.
  6. "Detection of new genes in a bacterial genome using Markov models for three gene classes."
    Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.
    Nucleic Acids Res. 23:3554-3562(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYCCJ_ECOLI
AccessioniPrimary (citable) accession number: P0AB14
Secondary accession number(s): P46131
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 24, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.