Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized lipoprotein YmbA

Gene

ymbA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6492-MONOMER.
ECOL316407:JW5127-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YmbA
Gene namesi
Name:ymbA
Ordered Locus Names:b0952, JW5127
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13719. ymbA.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 15PROSITE-ProRule annotationAdd BLAST15
ChainiPRO_000016877916 – 187Uncharacterized lipoprotein YmbAAdd BLAST172

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi16N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi16S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP0AB10.
PRIDEiP0AB10.

Interactioni

Protein-protein interaction databases

BioGridi4260029. 4 interactors.
DIPiDIP-48221N.
IntActiP0AB10. 4 interactors.
STRINGi511145.b0952.

Structurei

3D structure databases

ProteinModelPortaliP0AB10.
SMRiP0AB10.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108Q2G. Bacteria.
COG3009. LUCA.
HOGENOMiHOG000283606.
KOiK09857.
OMAiGWAQESA.

Family and domain databases

Gene3Di3.40.50.10610. 1 hit.
InterProiIPR005586. ABC_trans_aux.
[Graphical view]
PfamiPF03886. ABC_trans_aux. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AB10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKWLVTIAA LWLAGCSSGE INKNYYQLPV VQSGTQSTAS QGNRLLWVEQ
60 70 80 90 100
VTVPDYLAGN GVVYQTSDVK YVIANNNLWA SPLDQQLRNT LVANLSTQLP
110 120 130 140 150
GWVVASQPLG SAQDTLNVTV TEFNGRYDGK VIVSGEWLLN HQGQLIKRPF
160 170 180
RLEGVQTQDG YDEMVKVLAG VWSQEAASIA QEIKRLP
Length:187
Mass (Da):20,634
Last modified:June 26, 2007 - v2
Checksum:i05AEDF8BD62B6D5C
GO

Sequence cautioni

The sequence BAA35710 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74038.2.
AP009048 Genomic DNA. Translation: BAA35710.2. Different initiation.
PIRiG64835.
RefSeqiNP_415472.2. NC_000913.3.
WP_000759120.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74038; AAC74038; b0952.
BAA35710; BAA35710; BAA35710.
GeneIDi946972.
KEGGiecj:JW5127.
eco:b0952.
PATRICi32117123. VBIEscCol129921_0986.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74038.2.
AP009048 Genomic DNA. Translation: BAA35710.2. Different initiation.
PIRiG64835.
RefSeqiNP_415472.2. NC_000913.3.
WP_000759120.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AB10.
SMRiP0AB10.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260029. 4 interactors.
DIPiDIP-48221N.
IntActiP0AB10. 4 interactors.
STRINGi511145.b0952.

Proteomic databases

PaxDbiP0AB10.
PRIDEiP0AB10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74038; AAC74038; b0952.
BAA35710; BAA35710; BAA35710.
GeneIDi946972.
KEGGiecj:JW5127.
eco:b0952.
PATRICi32117123. VBIEscCol129921_0986.

Organism-specific databases

EchoBASEiEB3483.
EcoGeneiEG13719. ymbA.

Phylogenomic databases

eggNOGiENOG4108Q2G. Bacteria.
COG3009. LUCA.
HOGENOMiHOG000283606.
KOiK09857.
OMAiGWAQESA.

Enzyme and pathway databases

BioCyciEcoCyc:G6492-MONOMER.
ECOL316407:JW5127-MONOMER.

Miscellaneous databases

PROiP0AB10.

Family and domain databases

Gene3Di3.40.50.10610. 1 hit.
InterProiIPR005586. ABC_trans_aux.
[Graphical view]
PfamiPF03886. ABC_trans_aux. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYMBA_ECOLI
AccessioniPrimary (citable) accession number: P0AB10
Secondary accession number(s): P75866, Q9R7Q4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: June 26, 2007
Last modified: November 2, 2016
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.