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Protein

Uncharacterized protein YcbK

Gene

ycbK

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6474-MONOMER.
ECOL316407:JW0909-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcbK
Gene namesi
Name:ycbK
Ordered Locus Names:b0926, JW0909
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13703. ycbK.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3030Tat-type signalPROSITE-ProRule annotationAdd
BLAST
Chaini31 – 182152Uncharacterized protein YcbKPRO_0000168773Add
BLAST

Post-translational modificationi

Exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.

Proteomic databases

PaxDbiP0AB06.

Interactioni

Protein-protein interaction databases

BioGridi4260016. 11 interactions.
IntActiP0AB06. 9 interactions.
STRINGi511145.b0926.

Structurei

3D structure databases

ProteinModelPortaliP0AB06.
SMRiP0AB06. Positions 81-143.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_1666.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105EAQ. Bacteria.
COG3108. LUCA.
HOGENOMiHOG000273967.
InParanoidiP0AB06.
OMAiKKSYHMK.
PhylomeDBiP0AB06.

Family and domain databases

Gene3Di3.30.1380.10. 1 hit.
InterProiIPR010275. DUF882.
IPR009045. Hedgehog_sig/DD-Pept_Zn-bd_dom.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05951. Peptidase_M15_2. 1 hit.
[Graphical view]
SUPFAMiSSF55166. SSF55166. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AB06-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKFDANRRK LLALGGVALG AAILPTPAFA TLSTPRPRIL TLNNLHTGES
60 70 80 90 100
IKAEFFDGRG YIQEELAKLN HFFRDYRANK IKSIDPGLFD QLYRLQGLLG
110 120 130 140 150
TRKPVQLISG YRSIDTNNEL RARSRGVAKK SYHTKGQAMD FHIEGIALSN
160 170 180
IRKAALSMRA GGVGYYPRSN FVHIDTGPAR HW
Length:182
Mass (Da):20,354
Last modified:October 11, 2005 - v1
Checksum:i2900C1C707F81483
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74012.1.
AP009048 Genomic DNA. Translation: BAA35672.1.
PIRiE64832.
RefSeqiNP_415446.1. NC_000913.3.
WP_001295932.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74012; AAC74012; b0926.
BAA35672; BAA35672; BAA35672.
GeneIDi945538.
KEGGiecj:JW0909.
eco:b0926.
PATRICi32117065. VBIEscCol129921_0957.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74012.1.
AP009048 Genomic DNA. Translation: BAA35672.1.
PIRiE64832.
RefSeqiNP_415446.1. NC_000913.3.
WP_001295932.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AB06.
SMRiP0AB06. Positions 81-143.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260016. 11 interactions.
IntActiP0AB06. 9 interactions.
STRINGi511145.b0926.

Proteomic databases

PaxDbiP0AB06.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74012; AAC74012; b0926.
BAA35672; BAA35672; BAA35672.
GeneIDi945538.
KEGGiecj:JW0909.
eco:b0926.
PATRICi32117065. VBIEscCol129921_0957.

Organism-specific databases

EchoBASEiEB3467.
EcoGeneiEG13703. ycbK.

Phylogenomic databases

eggNOGiENOG4105EAQ. Bacteria.
COG3108. LUCA.
HOGENOMiHOG000273967.
InParanoidiP0AB06.
OMAiKKSYHMK.
PhylomeDBiP0AB06.

Enzyme and pathway databases

BioCyciEcoCyc:G6474-MONOMER.
ECOL316407:JW0909-MONOMER.

Miscellaneous databases

PROiP0AB06.

Family and domain databases

Gene3Di3.30.1380.10. 1 hit.
InterProiIPR010275. DUF882.
IPR009045. Hedgehog_sig/DD-Pept_Zn-bd_dom.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05951. Peptidase_M15_2. 1 hit.
[Graphical view]
SUPFAMiSSF55166. SSF55166. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCBK_ECOLI
AccessioniPrimary (citable) accession number: P0AB06
Secondary accession number(s): P75848
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.