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Protein

Inner membrane protein YbjO

Gene

ybjO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6448-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbjO
Gene namesi
Name:ybjO
Ordered Locus Names:b0858, JW0842
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13684 ybjO

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 23PeriplasmicSequence analysisAdd BLAST23
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Topological domaini45 – 66CytoplasmicSequence analysisAdd BLAST22
Transmembranei67 – 87HelicalSequence analysisAdd BLAST21
Topological domaini88 – 94PeriplasmicSequence analysis7
Transmembranei95 – 115HelicalSequence analysisAdd BLAST21
Topological domaini116 – 162CytoplasmicSequence analysisAdd BLAST47

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001687471 – 162Inner membrane protein YbjOAdd BLAST162

Proteomic databases

PaxDbiP0AAZ0
PRIDEiP0AAZ0

Interactioni

Protein-protein interaction databases

BioGridi4261280, 11 interactors
DIPiDIP-48193N
IntActiP0AAZ0, 1 interactor
STRINGi316385.ECDH10B_0928

Structurei

3D structure databases

ProteinModelPortaliP0AAZ0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105RBQ Bacteria
ENOG4111U50 LUCA
HOGENOMiHOG000118249
OMAiTGYLWAA

Family and domain databases

InterProiView protein in InterPro
IPR019703 DUF2593
PfamiView protein in Pfam
PF10767 DUF2593, 1 hit

Sequencei

Sequence statusi: Complete.

P0AAZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDETLGFFK KTSSSHARLN VPALVQVAAL AIIMIRGLDV LMIFNTLGVR
60 70 80 90 100
GIGEFIHRSV QTWSLTLVFL SSLVLVFIEI WCAFSLVKGR RWARWLYLLT
110 120 130 140 150
QITAASYLWA ASLGYGYPEL FSIPGESKRE IFHSLMLQKL PDMLILMLLF
160
VPSTSRRFFQ LQ
Length:162
Mass (Da):18,518
Last modified:October 11, 2005 - v1
Checksum:iC618B11524CB0DCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC73945.1
AP009048 Genomic DNA Translation: BAA35569.1
PIRiB64824
RefSeqiNP_415379.1, NC_000913.3
WP_000389260.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73945; AAC73945; b0858
BAA35569; BAA35569; BAA35569
GeneIDi945488
KEGGiecj:JW0842
eco:b0858
PATRICifig|1411691.4.peg.1419

Similar proteinsi

Entry informationi

Entry nameiYBJO_ECOLI
AccessioniPrimary (citable) accession number: P0AAZ0
Secondary accession number(s): P75816
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 28, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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