Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YbjN

Gene

ybjN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • negative regulation of bacterial-type flagellum assembly Source: CACAO
  • negative regulation of bacterial-type flagellum-dependent cell motility Source: EcoCyc
  • negative regulation of cell growth Source: CACAO
  • negative regulation of single-species biofilm formation on inanimate substrate Source: CACAO
  • pilus assembly Source: CACAO
  • regulation of bacterial-type flagellum assembly Source: CACAO
  • response to ionizing radiation Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6447-MONOMER.
ECOL316407:JW0837-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbjN
Gene namesi
Name:ybjN
Ordered Locus Names:b0853, JW0837
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13683. ybjN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158Uncharacterized protein YbjNPRO_0000168743Add
BLAST

Proteomic databases

PaxDbiP0AAY6.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
ypjFQ469533EBI-9138440,EBI-9134503

Protein-protein interaction databases

BioGridi4259993. 9 interactions.
IntActiP0AAY6. 7 interactions.
STRINGi511145.b0853.

Structurei

3D structure databases

ProteinModelPortaliP0AAY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108RMJ. Bacteria.
ENOG4111FKB. LUCA.
HOGENOMiHOG000276367.
InParanoidiP0AAY6.
OMAiSEEQVSM.
OrthoDBiEOG60655C.

Family and domain databases

InterProiIPR019660. Put_sensory_transdc_reg_YbjN.
[Graphical view]
PfamiPF10722. YbjN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AAY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSLVVPGLD TLRQWLDDLG MSFFECDNCQ ALHLPHMQNF DGVFDAKIDL
60 70 80 90 100
IDNTILFSAM AEVRPSAVLP LAADLSAINA SSLTVKAFLD MQDDNLPKLV
110 120 130 140 150
VCQSLSVMQG VTYEQFAWFV RQSEEQISMV ILEANAHQLL LPTDDEGQNN

VTENYFLH
Length:158
Mass (Da):17,666
Last modified:October 11, 2005 - v1
Checksum:i3B28AD6A04C3FF2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73940.1.
AP009048 Genomic DNA. Translation: BAA35564.1.
PIRiE64823.
RefSeqiNP_415374.1. NC_000913.3.
WP_000203025.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73940; AAC73940; b0853.
BAA35564; BAA35564; BAA35564.
GeneIDi945482.
KEGGiecj:JW0837.
eco:b0853.
PATRICi32116911. VBIEscCol129921_0881.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73940.1.
AP009048 Genomic DNA. Translation: BAA35564.1.
PIRiE64823.
RefSeqiNP_415374.1. NC_000913.3.
WP_000203025.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAY6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259993. 9 interactions.
IntActiP0AAY6. 7 interactions.
STRINGi511145.b0853.

Proteomic databases

PaxDbiP0AAY6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73940; AAC73940; b0853.
BAA35564; BAA35564; BAA35564.
GeneIDi945482.
KEGGiecj:JW0837.
eco:b0853.
PATRICi32116911. VBIEscCol129921_0881.

Organism-specific databases

EchoBASEiEB3447.
EcoGeneiEG13683. ybjN.

Phylogenomic databases

eggNOGiENOG4108RMJ. Bacteria.
ENOG4111FKB. LUCA.
HOGENOMiHOG000276367.
InParanoidiP0AAY6.
OMAiSEEQVSM.
OrthoDBiEOG60655C.

Enzyme and pathway databases

BioCyciEcoCyc:G6447-MONOMER.
ECOL316407:JW0837-MONOMER.

Miscellaneous databases

PROiP0AAY6.

Family and domain databases

InterProiIPR019660. Put_sensory_transdc_reg_YbjN.
[Graphical view]
PfamiPF10722. YbjN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYBJN_ECOLI
AccessioniPrimary (citable) accession number: P0AAY6
Secondary accession number(s): P75815
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 20, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.