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Protein

Uncharacterized protein YbiJ

Gene

ybiJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki

Enzyme and pathway databases

BioCyciEcoCyc:EG12422-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbiJ
Gene namesi
Name:ybiJ
Ordered Locus Names:b0802, JW0787
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12422 ybiJ

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000001381223 – 86Uncharacterized protein YbiJAdd BLAST64

Proteomic databases

PaxDbiP0AAX3
PRIDEiP0AAX3

Interactioni

Protein-protein interaction databases

BioGridi4259967, 17 interactors
STRINGi316385.ECDH10B_0870

Structurei

3D structure databases

ProteinModelPortaliP0AAX3
SMRiP0AAX3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the BhsA/McbA family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105VR4 Bacteria
ENOG41122K9 LUCA
HOGENOMiHOG000117400
InParanoidiP0AAX3
OMAiKAYSITS
PhylomeDBiP0AAX3

Family and domain databases

Gene3Di3.30.1660.10, 1 hit
InterProiView protein in InterPro
IPR025543 Dodecin-like
IPR010854 DUF1471
IPR036275 YdgH-like_sf
PfamiView protein in Pfam
PF07338 DUF1471, 1 hit
SUPFAMiSSF159871 SSF159871, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AAX3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTINTVVAA MALSTLSFGV FAAEPVTASQ AQNMNKIGVV SADGASTLDA
60 70 80
LEAKLAEKAA AAGASGYSIT SATNNNKLSG TAVIYK
Length:86
Mass (Da):8,568
Last modified:October 11, 2005 - v1
Checksum:iF939229B644FF8E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L02123 Genomic DNA No translation available.
U00096 Genomic DNA Translation: AAC73889.1
AP009048 Genomic DNA Translation: BAA35468.1
PIRiB64817
RefSeqiNP_415323.1, NC_000913.3
WP_000849301.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73889; AAC73889; b0802
BAA35468; BAA35468; BAA35468
GeneIDi945433
KEGGiecj:JW0787
eco:b0802
PATRICifig|511145.12.peg.829

Similar proteinsi

Entry informationi

Entry nameiYBIJ_ECOLI
AccessioniPrimary (citable) accession number: P0AAX3
Secondary accession number(s): P41038
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 28, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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