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Protein

Inner membrane protein YbhQ

Gene

ybhQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6408-MONOMER.
ECOL316407:JW0774-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbhQ
Gene namesi
Name:ybhQ
Ordered Locus Names:b0791, JW0774
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13673. ybhQ.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 12CytoplasmicSequence analysisAdd BLAST12
Transmembranei13 – 33HelicalSequence analysisAdd BLAST21
Topological domaini34 – 37PeriplasmicSequence analysis4
Transmembranei38 – 58HelicalSequence analysisAdd BLAST21
Topological domaini59 – 71CytoplasmicSequence analysisAdd BLAST13
Transmembranei72 – 92HelicalSequence analysisAdd BLAST21
Topological domaini93 – 99PeriplasmicSequence analysis7
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Topological domaini121 – 136CytoplasmicSequence analysisAdd BLAST16

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001687201 – 136Inner membrane protein YbhQAdd BLAST136

Proteomic databases

PaxDbiP0AAW5.
PRIDEiP0AAW5.

Interactioni

Protein-protein interaction databases

BioGridi4261833. 8 interactors.
STRINGi511145.b0791.

Structurei

3D structure databases

ProteinModelPortaliP0AAW5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105I9U. Bacteria.
ENOG4111RY6. LUCA.
HOGENOMiHOG000118090.
OMAiHEARWRE.

Family and domain databases

InterProiIPR021303. Uncharacterised_YbhQ.
[Graphical view]
PfamiPF11076. YbhQ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AAW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKWQQRVRVA TGLSCWQIML HLLVVALLVV GWMSKTLVHV GVGLCALYCV
60 70 80 90 100
TVVMMLVFQR HPEQRWREVA DVLEELTTTW YFGAALIVLW LLSRVLENNF
110 120 130
LLAIAGLAIL AGPAVVSLLA KDKKLHHLTS KHRVRR
Length:136
Mass (Da):15,465
Last modified:October 11, 2005 - v1
Checksum:i9E497B0FD664AB56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73878.1.
AP009048 Genomic DNA. Translation: BAA35450.1.
PIRiG64815.
RefSeqiNP_415312.1. NC_000913.3.
WP_000871982.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73878; AAC73878; b0791.
BAA35450; BAA35450; BAA35450.
GeneIDi945405.
KEGGiecj:JW0774.
eco:b0791.
PATRICi32116783. VBIEscCol129921_0817.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73878.1.
AP009048 Genomic DNA. Translation: BAA35450.1.
PIRiG64815.
RefSeqiNP_415312.1. NC_000913.3.
WP_000871982.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAW5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261833. 8 interactors.
STRINGi511145.b0791.

Proteomic databases

PaxDbiP0AAW5.
PRIDEiP0AAW5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73878; AAC73878; b0791.
BAA35450; BAA35450; BAA35450.
GeneIDi945405.
KEGGiecj:JW0774.
eco:b0791.
PATRICi32116783. VBIEscCol129921_0817.

Organism-specific databases

EchoBASEiEB3437.
EcoGeneiEG13673. ybhQ.

Phylogenomic databases

eggNOGiENOG4105I9U. Bacteria.
ENOG4111RY6. LUCA.
HOGENOMiHOG000118090.
OMAiHEARWRE.

Enzyme and pathway databases

BioCyciEcoCyc:G6408-MONOMER.
ECOL316407:JW0774-MONOMER.

Miscellaneous databases

PROiP0AAW5.

Family and domain databases

InterProiIPR021303. Uncharacterised_YbhQ.
[Graphical view]
PfamiPF11076. YbhQ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBHQ_ECOLI
AccessioniPrimary (citable) accession number: P0AAW5
Secondary accession number(s): P75773
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.