Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Inner membrane protein YbhQ

Gene

ybhQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6408-MONOMER.
ECOL316407:JW0774-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbhQ
Gene namesi
Name:ybhQ
Ordered Locus Names:b0791, JW0774
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13673. ybhQ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1212CytoplasmicSequence analysisAdd
BLAST
Transmembranei13 – 3321HelicalSequence analysisAdd
BLAST
Topological domaini34 – 374PeriplasmicSequence analysis
Transmembranei38 – 5821HelicalSequence analysisAdd
BLAST
Topological domaini59 – 7113CytoplasmicSequence analysisAdd
BLAST
Transmembranei72 – 9221HelicalSequence analysisAdd
BLAST
Topological domaini93 – 997PeriplasmicSequence analysis
Transmembranei100 – 12021HelicalSequence analysisAdd
BLAST
Topological domaini121 – 13616CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 136136Inner membrane protein YbhQPRO_0000168720Add
BLAST

Proteomic databases

PaxDbiP0AAW5.

Interactioni

Protein-protein interaction databases

BioGridi4261833. 8 interactions.
STRINGi511145.b0791.

Structurei

3D structure databases

ProteinModelPortaliP0AAW5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105I9U. Bacteria.
ENOG4111RY6. LUCA.
HOGENOMiHOG000118090.
OMAiHEARWRE.

Family and domain databases

InterProiIPR021303. Uncharacterised_YbhQ.
[Graphical view]
PfamiPF11076. YbhQ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AAW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKWQQRVRVA TGLSCWQIML HLLVVALLVV GWMSKTLVHV GVGLCALYCV
60 70 80 90 100
TVVMMLVFQR HPEQRWREVA DVLEELTTTW YFGAALIVLW LLSRVLENNF
110 120 130
LLAIAGLAIL AGPAVVSLLA KDKKLHHLTS KHRVRR
Length:136
Mass (Da):15,465
Last modified:October 11, 2005 - v1
Checksum:i9E497B0FD664AB56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73878.1.
AP009048 Genomic DNA. Translation: BAA35450.1.
PIRiG64815.
RefSeqiNP_415312.1. NC_000913.3.
WP_000871982.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73878; AAC73878; b0791.
BAA35450; BAA35450; BAA35450.
GeneIDi945405.
KEGGiecj:JW0774.
eco:b0791.
PATRICi32116783. VBIEscCol129921_0817.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73878.1.
AP009048 Genomic DNA. Translation: BAA35450.1.
PIRiG64815.
RefSeqiNP_415312.1. NC_000913.3.
WP_000871982.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAW5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261833. 8 interactions.
STRINGi511145.b0791.

Proteomic databases

PaxDbiP0AAW5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73878; AAC73878; b0791.
BAA35450; BAA35450; BAA35450.
GeneIDi945405.
KEGGiecj:JW0774.
eco:b0791.
PATRICi32116783. VBIEscCol129921_0817.

Organism-specific databases

EchoBASEiEB3437.
EcoGeneiEG13673. ybhQ.

Phylogenomic databases

eggNOGiENOG4105I9U. Bacteria.
ENOG4111RY6. LUCA.
HOGENOMiHOG000118090.
OMAiHEARWRE.

Enzyme and pathway databases

BioCyciEcoCyc:G6408-MONOMER.
ECOL316407:JW0774-MONOMER.

Miscellaneous databases

PROiP0AAW5.

Family and domain databases

InterProiIPR021303. Uncharacterised_YbhQ.
[Graphical view]
PfamiPF11076. YbhQ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBHQ_ECOLI
AccessioniPrimary (citable) accession number: P0AAW5
Secondary accession number(s): P75773
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.