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Protein

Uncharacterized protein YbhP

Gene

ybhP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6407-MONOMER.
ECOL316407:JW0773-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbhP
Gene namesi
Name:ybhP
Ordered Locus Names:b0790, JW0773
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13672. ybhP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 253253Uncharacterized protein YbhPPRO_0000168716Add
BLAST

Proteomic databases

PaxDbiP0AAW1.
PRIDEiP0AAW1.

Interactioni

Protein-protein interaction databases

BioGridi4261832. 81 interactions.
DIPiDIP-48150N.
IntActiP0AAW1. 2 interactions.
STRINGi511145.b0790.

Structurei

3D structure databases

ProteinModelPortaliP0AAW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105X23. Bacteria.
COG3568. LUCA.
HOGENOMiHOG000261042.
InParanoidiP0AAW1.
OMAiKPARSFP.
OrthoDBiEOG66QKW4.
PhylomeDBiP0AAW1.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PfamiPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AAW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDQTQQFSF KVLTINIHKG FTAFNRRFIL PELRDAVRTV SADIVCLQEV
60 70 80 90 100
MGAHEVHPLH VENWPDTSHY EFLADTMWSD FAYGRNAVYP EGHHGNAVLS
110 120 130 140 150
RYPIEHYENR DVSVDGAEKR GVLYCRIVPP MTGKAIHVMC VHLGLREAHR
160 170 180 190 200
QAQLAMLAEW VNELPDGEPV LVAGDFNDWR QKANHPLKVQ AGLDEIFTRA
210 220 230 240 250
HGRPARTFPV QFPLLRLDRI YVKNASASAP TALPLRTWRH LSDHAPLSAE

IHL
Length:253
Mass (Da):28,790
Last modified:October 11, 2005 - v1
Checksum:iDEB29724626A167B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73877.1.
AP009048 Genomic DNA. Translation: BAA35449.1.
PIRiF64815.
RefSeqiNP_415311.1. NC_000913.3.
WP_001113348.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73877; AAC73877; b0790.
BAA35449; BAA35449; BAA35449.
GeneIDi945408.
KEGGiecj:JW0773.
eco:b0790.
PATRICi32116781. VBIEscCol129921_0816.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73877.1.
AP009048 Genomic DNA. Translation: BAA35449.1.
PIRiF64815.
RefSeqiNP_415311.1. NC_000913.3.
WP_001113348.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAW1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261832. 81 interactions.
DIPiDIP-48150N.
IntActiP0AAW1. 2 interactions.
STRINGi511145.b0790.

Proteomic databases

PaxDbiP0AAW1.
PRIDEiP0AAW1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73877; AAC73877; b0790.
BAA35449; BAA35449; BAA35449.
GeneIDi945408.
KEGGiecj:JW0773.
eco:b0790.
PATRICi32116781. VBIEscCol129921_0816.

Organism-specific databases

EchoBASEiEB3436.
EcoGeneiEG13672. ybhP.

Phylogenomic databases

eggNOGiENOG4105X23. Bacteria.
COG3568. LUCA.
HOGENOMiHOG000261042.
InParanoidiP0AAW1.
OMAiKPARSFP.
OrthoDBiEOG66QKW4.
PhylomeDBiP0AAW1.

Enzyme and pathway databases

BioCyciEcoCyc:G6407-MONOMER.
ECOL316407:JW0773-MONOMER.

Miscellaneous databases

PROiP0AAW1.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PfamiPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYBHP_ECOLI
AccessioniPrimary (citable) accession number: P0AAW1
Secondary accession number(s): P75772
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 13, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.