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Protein

Putative isomerase YbhH

Gene

ybhH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Enzyme and pathway databases

BioCyciEcoCyc:G6399-MONOMER.
ECOL316407:JW0752-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative isomerase YbhH (EC:5.-.-.-)
Gene namesi
Name:ybhH
Ordered Locus Names:b0769, JW0752
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13664. ybhH.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 350350Putative isomerase YbhHPRO_0000168711Add
BLAST

Proteomic databases

PaxDbiP0AAV8.

Interactioni

Protein-protein interaction databases

BioGridi4261843. 8 interactions.
STRINGi511145.b0769.

Structurei

3D structure databases

ProteinModelPortaliP0AAV8.
SMRiP0AAV8. Positions 3-349.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PrpF family.Curated

Phylogenomic databases

eggNOGiENOG4105C7F. Bacteria.
COG2828. LUCA.
HOGENOMiHOG000220028.
InParanoidiP0AAV8.
KOiK09788.
OMAiTLQVRYF.
PhylomeDBiP0AAV8.

Family and domain databases

InterProiIPR007400. PrpF_protein.
[Graphical view]
PfamiPF04303. PrpF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AAV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKIPCVMMR GGTSRGAFLL AEHLPEDQTQ RDKILMAIMG SGNDLEIDGI
60 70 80 90 100
GGGNPLTSKV AIISRSSDPR ADVDYLFAQV IVHEQRVDTT PNCGNMLSGV
110 120 130 140 150
GAFAIENGLI AATSPVTRVR IRNVNTGTFI EADVQTPNGV VEYEGSARID
160 170 180 190 200
GVPGTAAPVA LTFLNAAGTK TGKVFPTDNQ IDYFDDVPVT CIDMAMPVVI
210 220 230 240 250
IPAEYLGKTG YELPAELDAD KALLARIESI RLQAGKAMGL GDVSNMVIPK
260 270 280 290 300
PVLISPAQKG GAINVRYFMP HSCHRALAIT GAIAISSSCA LEGTVTRQIV
310 320 330 340 350
PSVGYGNINI EHPSGALDVH LSNEGQDATT LRASVIRTTR KIFSGEVYLP
Length:350
Mass (Da):37,060
Last modified:October 11, 2005 - v1
Checksum:i1485829DDABEE658
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73856.1.
AP009048 Genomic DNA. Translation: BAA35433.1.
PIRiA64813.
RefSeqiNP_415290.1. NC_000913.3.
WP_000723652.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73856; AAC73856; b0769.
BAA35433; BAA35433; BAA35433.
GeneIDi945375.
KEGGiecj:JW0752.
eco:b0769.
PATRICi32116739. VBIEscCol129921_0795.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73856.1.
AP009048 Genomic DNA. Translation: BAA35433.1.
PIRiA64813.
RefSeqiNP_415290.1. NC_000913.3.
WP_000723652.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAV8.
SMRiP0AAV8. Positions 3-349.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261843. 8 interactions.
STRINGi511145.b0769.

Proteomic databases

PaxDbiP0AAV8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73856; AAC73856; b0769.
BAA35433; BAA35433; BAA35433.
GeneIDi945375.
KEGGiecj:JW0752.
eco:b0769.
PATRICi32116739. VBIEscCol129921_0795.

Organism-specific databases

EchoBASEiEB3428.
EcoGeneiEG13664. ybhH.

Phylogenomic databases

eggNOGiENOG4105C7F. Bacteria.
COG2828. LUCA.
HOGENOMiHOG000220028.
InParanoidiP0AAV8.
KOiK09788.
OMAiTLQVRYF.
PhylomeDBiP0AAV8.

Enzyme and pathway databases

BioCyciEcoCyc:G6399-MONOMER.
ECOL316407:JW0752-MONOMER.

Miscellaneous databases

PROiP0AAV8.

Family and domain databases

InterProiIPR007400. PrpF_protein.
[Graphical view]
PfamiPF04303. PrpF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBHH_ECOLI
AccessioniPrimary (citable) accession number: P0AAV8
Secondary accession number(s): P75762
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.