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Protein

Uncharacterized protein YbgS

Gene

ybgS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6394-MONOMER.
ECOL316407:JW0736-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbgS
Gene namesi
Name:ybgS
Ordered Locus Names:b0753, JW0736
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13663. ybgS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 126102Uncharacterized protein YbgSPRO_0000013808Add
BLAST

Proteomic databases

EPDiP0AAV6.
PaxDbiP0AAV6.
PRIDEiP0AAV6.

Interactioni

Protein-protein interaction databases

BioGridi4259667. 7 interactions.
STRINGi511145.b0753.

Structurei

3D structure databases

ProteinModelPortaliP0AAV6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105JND. Bacteria.
ENOG4111NF4. LUCA.
HOGENOMiHOG000118035.
InParanoidiP0AAV6.
OMAiTMLHPNG.
OrthoDBiEOG6WDSM0.

Family and domain databases

InterProiIPR020363. Uncharacterised_YbgS.
[Graphical view]
PfamiPF13985. YbgS. 1 hit.
[Graphical view]
ProDomiPD079292. Uncharacterised_YbgS. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AAV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMTKLATLF LTATLSLASG AALAADSGAQ TNNGQANAAA DAGQVAPDAR
60 70 80 90 100
ENVAPNNVDN NGVNTGSGGT MLHSDGSSMN NDGMTKDEEH KNTMCKDGRC
110 120
PDINKKVQTG DGINNDVDTK TDGTTQ
Length:126
Mass (Da):12,872
Last modified:October 11, 2005 - v1
Checksum:iE83C38EA44EAC0D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73840.1.
AP009048 Genomic DNA. Translation: BAA35415.1.
PIRiA64811.
RefSeqiNP_415274.1. NC_000913.3.
WP_000784351.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73840; AAC73840; b0753.
BAA35415; BAA35415; BAA35415.
GeneIDi945356.
KEGGiecj:JW0736.
eco:b0753.
PATRICi32116705. VBIEscCol129921_0778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73840.1.
AP009048 Genomic DNA. Translation: BAA35415.1.
PIRiA64811.
RefSeqiNP_415274.1. NC_000913.3.
WP_000784351.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAV6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259667. 7 interactions.
STRINGi511145.b0753.

Proteomic databases

EPDiP0AAV6.
PaxDbiP0AAV6.
PRIDEiP0AAV6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73840; AAC73840; b0753.
BAA35415; BAA35415; BAA35415.
GeneIDi945356.
KEGGiecj:JW0736.
eco:b0753.
PATRICi32116705. VBIEscCol129921_0778.

Organism-specific databases

EchoBASEiEB3427.
EcoGeneiEG13663. ybgS.

Phylogenomic databases

eggNOGiENOG4105JND. Bacteria.
ENOG4111NF4. LUCA.
HOGENOMiHOG000118035.
InParanoidiP0AAV6.
OMAiTMLHPNG.
OrthoDBiEOG6WDSM0.

Enzyme and pathway databases

BioCyciEcoCyc:G6394-MONOMER.
ECOL316407:JW0736-MONOMER.

Miscellaneous databases

PROiP0AAV6.

Family and domain databases

InterProiIPR020363. Uncharacterised_YbgS.
[Graphical view]
PfamiPF13985. YbgS. 1 hit.
[Graphical view]
ProDomiPD079292. Uncharacterised_YbgS. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYBGS_ECOLI
AccessioniPrimary (citable) accession number: P0AAV6
Secondary accession number(s): P75758
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 16, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.