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P0AAV6 (YBGS_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YbgS
Gene names
Name:ybgS
Ordered Locus Names:b0753, JW0736
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length126 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential
Chain25 – 126102Uncharacterized protein YbgS
PRO_0000013808

Sequences

Sequence LengthMass (Da)Tools
P0AAV6 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: E83C38EA44EAC0D6

FASTA12612,872
        10         20         30         40         50         60 
MKMTKLATLF LTATLSLASG AALAADSGAQ TNNGQANAAA DAGQVAPDAR ENVAPNNVDN 

        70         80         90        100        110        120 
NGVNTGSGGT MLHSDGSSMN NDGMTKDEEH KNTMCKDGRC PDINKKVQTG DGINNDVDTK 


TDGTTQ 

« Hide

References

[1]"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map."
Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. expand/collapse author list , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T.
DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. Translation: AAC73840.1.
AP009048 Genomic DNA. Translation: BAA35415.1.
PIRA64811.
RefSeqNP_415274.1. NC_000913.2.
YP_489026.1. NC_007779.1.

3D structure databases

ProteinModelPortalP0AAV6.
ModBaseSearch...

Protein-protein interaction databases

STRING511145.b0753.

Proteomic databases

PaxDbP0AAV6.
PRIDEP0AAV6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC73840; AAC73840; b0753.
BAA35415; BAA35415; BAA35415.
GeneID12930673.
945356.
KEGGecj:Y75_p0726.
eco:b0753.
PATRIC32116705. VBIEscCol129921_0778.

Organism-specific databases

EchoBASEEB3427.
EcoGeneEG13663. ybgS.

Phylogenomic databases

eggNOGNOG12064.
HOGENOMHOG000118035.
OMAMCKDGKC.
ProtClustDBCLSK879746.

Enzyme and pathway databases

BioCycEcoCyc:G6394-MONOMER.
ECOL316407:JW0736-MONOMER.

Gene expression databases

GenevestigatorP0AAV6.

Family and domain databases

InterProIPR020363. Uncharacterised_YbgS.
[Graphical view]
PfamPF13985. YbgS. 1 hit.
[Graphical view]
ProDomPD079292. Uncharacterised_YbgS. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameYBGS_ECOLI
AccessionPrimary (citable) accession number: P0AAV6
Secondary accession number(s): P75758
Entry history
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene