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Protein

Inner membrane protein YbaN

Gene

ybaN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12843-MONOMER.
ECOL316407:JW0457-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbaN
Gene namesi
Name:ybaN
Ordered Locus Names:b0468, JW0457
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12843. ybaN.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 6CytoplasmicSequence analysis6
Transmembranei7 – 26HelicalSequence analysisAdd BLAST20
Topological domaini27 – 45PeriplasmicSequence analysisAdd BLAST19
Transmembranei46 – 63HelicalSequence analysisAdd BLAST18
Topological domaini64 – 74CytoplasmicSequence analysisAdd BLAST11
Transmembranei75 – 92HelicalSequence analysisAdd BLAST18
Topological domaini93 – 95PeriplasmicSequence analysis3
Transmembranei96 – 118HelicalSequence analysisAdd BLAST23
Topological domaini119 – 125CytoplasmicSequence analysis7

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686251 – 125Inner membrane protein YbaNAdd BLAST125

Proteomic databases

PaxDbiP0AAR5.
PRIDEiP0AAR5.

Interactioni

Protein-protein interaction databases

BioGridi4261713. 10 interactors.
STRINGi511145.b0468.

Structurei

3D structure databases

ProteinModelPortaliP0AAR5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105WD1. Bacteria.
COG2832. LUCA.
HOGENOMiHOG000277594.
InParanoidiP0AAR5.
KOiK09790.
OMAiGSYLRHW.
PhylomeDBiP0AAR5.

Family and domain databases

InterProiIPR007401. DUF454.
[Graphical view]
PfamiPF04304. DUF454. 1 hit.
[Graphical view]
PIRSFiPIRSF016789. DUF454. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AAR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRIILIIIG WLAVVLGTLG VVLPVLPTTP FILLAAWCFA RSSPRFHAWL
60 70 80 90 100
LYRSWFGSYL RFWQKHHAMP RGVKPRAILL ILLTFAISLW FVQMPWVRIM
110 120
LLVILACLLF YMWRIPVIDE KQEKH
Length:125
Mass (Da):14,770
Last modified:October 11, 2005 - v1
Checksum:iF12848BDD9330764
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti70P → R (PubMed:1856227).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40222.1.
U00096 Genomic DNA. Translation: AAC73570.1.
AP009048 Genomic DNA. Translation: BAE76247.1.
D13958 Genomic DNA. No translation available.
U38660 Genomic DNA. Translation: AAA81028.1.
PIRiC64777.
RefSeqiNP_415001.1. NC_000913.3.
WP_001188905.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73570; AAC73570; b0468.
BAE76247; BAE76247; BAE76247.
GeneIDi945558.
KEGGiecj:JW0457.
eco:b0468.
PATRICi32116091. VBIEscCol129921_0487.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40222.1.
U00096 Genomic DNA. Translation: AAC73570.1.
AP009048 Genomic DNA. Translation: BAE76247.1.
D13958 Genomic DNA. No translation available.
U38660 Genomic DNA. Translation: AAA81028.1.
PIRiC64777.
RefSeqiNP_415001.1. NC_000913.3.
WP_001188905.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AAR5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261713. 10 interactors.
STRINGi511145.b0468.

Proteomic databases

PaxDbiP0AAR5.
PRIDEiP0AAR5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73570; AAC73570; b0468.
BAE76247; BAE76247; BAE76247.
GeneIDi945558.
KEGGiecj:JW0457.
eco:b0468.
PATRICi32116091. VBIEscCol129921_0487.

Organism-specific databases

EchoBASEiEB2692.
EcoGeneiEG12843. ybaN.

Phylogenomic databases

eggNOGiENOG4105WD1. Bacteria.
COG2832. LUCA.
HOGENOMiHOG000277594.
InParanoidiP0AAR5.
KOiK09790.
OMAiGSYLRHW.
PhylomeDBiP0AAR5.

Enzyme and pathway databases

BioCyciEcoCyc:EG12843-MONOMER.
ECOL316407:JW0457-MONOMER.

Miscellaneous databases

PROiP0AAR5.

Family and domain databases

InterProiIPR007401. DUF454.
[Graphical view]
PfamiPF04304. DUF454. 1 hit.
[Graphical view]
PIRSFiPIRSF016789. DUF454. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBAN_ECOLI
AccessioniPrimary (citable) accession number: P0AAR5
Secondary accession number(s): P45808, P77478, Q2MBV9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.