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Protein

Probable anaerobic dimethyl sulfoxide reductase chain YnfG

Gene

ynfG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds.

Cofactori

[4Fe-4S] clusterBy similarityNote: Binds 4 [4Fe-4S] clusters.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi14Iron-sulfur 1 (4Fe-4S)By similarity1
Metal bindingi17Iron-sulfur 1 (4Fe-4S)By similarity1
Metal bindingi20Iron-sulfur 1 (4Fe-4S)By similarity1
Metal bindingi24Iron-sulfur 2 (4Fe-4S)By similarity1
Metal bindingi67Iron-sulfur 3 (4Fe-4S)By similarity1
Metal bindingi70Iron-sulfur 3 (4Fe-4S)By similarity1
Metal bindingi75Iron-sulfur 3 (4Fe-4S)By similarity1
Metal bindingi79Iron-sulfur 4 (4Fe-4S)By similarity1
Metal bindingi99Iron-sulfur 4 (4Fe-4S)By similarity1
Metal bindingi102Iron-sulfur 4 (4Fe-4S)By similarity1
Metal bindingi105Iron-sulfur 4 (4Fe-4S)By similarity1
Metal bindingi109Iron-sulfur 3 (4Fe-4S)By similarity1
Metal bindingi126Iron-sulfur 2 (4Fe-4S)By similarity1
Metal bindingi129Iron-sulfur 2 (4Fe-4S)By similarity1
Metal bindingi141Iron-sulfur 2 (4Fe-4S)By similarity1
Metal bindingi145Iron-sulfur 1 (4Fe-4S)By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processElectron transport, Transport
Ligand4Fe-4S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6847-MONOMER
MetaCyc:G6847-MONOMER

Protein family/group databases

TCDBi5.A.3.3.1 the prokaryotic molybdopterin-containing oxidoreductase (pmo) family

Names & Taxonomyi

Protein namesi
Recommended name:
Probable anaerobic dimethyl sulfoxide reductase chain YnfG
Alternative name(s):
DMSO reductase iron-sulfur subunit YnfG
Gene namesi
Name:ynfG
Ordered Locus Names:b1589, JW1581
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13845 ynfG

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001592442 – 205Probable anaerobic dimethyl sulfoxide reductase chain YnfGAdd BLAST204

Proteomic databases

PaxDbiP0AAJ1
PRIDEiP0AAJ1

Interactioni

Subunit structurei

The complex consists of three subunits: YnfF, the reductase; YnfG, an electron transfer protein, and YnfH, a membrane anchor protein.Curated

Protein-protein interaction databases

BioGridi4263480, 23 interactors
DIPiDIP-48224N
STRINGi316385.ECDH10B_1722

Structurei

3D structure databases

ProteinModelPortaliP0AAJ1
SMRiP0AAJ1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 334Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd BLAST29
Domaini59 – 894Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd BLAST31
Domaini90 – 1194Fe-4S ferredoxin-type 3PROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105QAX Bacteria
COG0437 LUCA
HOGENOMiHOG000163387
InParanoidiP0AAJ1
KOiK07311
OMAiEGVSKKC
PhylomeDBiP0AAJ1

Family and domain databases

InterProiView protein in InterPro
IPR017896 4Fe4S_Fe-S-bd
IPR017900 4Fe4S_Fe_S_CS
IPR014297 DMSO_DmsB
PfamiView protein in Pfam
PF13247 Fer4_11, 1 hit
PF12800 Fer4_4, 1 hit
TIGRFAMsiTIGR02951 DMSO_dmsB, 1 hit
PROSITEiView protein in PROSITE
PS00198 4FE4S_FER_1, 1 hit
PS51379 4FE4S_FER_2, 3 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AAJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTQYGFFID SSRCTGCKTC ELACKDFKDL GPEVSFRRIY EYAGGDWQED
60 70 80 90 100
NGVWHQNVFA YYLSISCNHC DDPACTKVCP SGAMHKREDG FVVVDEDVCI
110 120 130 140 150
GCRYCHMACP YGAPQYNAEK GHMTKCDGCY SRVAEGKQPI CVESCPLRAL
160 170 180 190 200
EFGPIEELRQ KHGTLAAVAP LPRAHFTKPN IVIKPNANSR PTGDTTGYLA

NPEEV
Length:205
Mass (Da):22,752
Last modified:January 23, 2007 - v2
Checksum:iB3B899744005D51C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74661.1
AP009048 Genomic DNA Translation: BAA15313.1
PIRiG64914
RefSeqiNP_416106.1, NC_000913.3
WP_000213028.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74661; AAC74661; b1589
BAA15313; BAA15313; BAA15313
GeneIDi945638
KEGGiecj:JW1581
eco:b1589
PATRICifig|1411691.4.peg.673

Similar proteinsi

Entry informationi

Entry nameiYNFG_ECOLI
AccessioniPrimary (citable) accession number: P0AAJ1
Secondary accession number(s): P77313
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: January 23, 2007
Last modified: March 28, 2018
This is version 95 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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