P0AAI3 (FTSH_ECOLI) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 63.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: ATP-dependent zinc metalloprotease FtsH EC=3.4.24.- Alternative name(s): Cell division protease FtsH | ||||||
| Gene names |
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| Organism | Escherichia coli (strain K12) | ||||||
| Taxonomic identifier | 83333 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia |
Protein attributes
| Sequence length | 644 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins. Degrades a few membrane proteins that have not been assembled into complexes such as SecY, F0 ATPase subunit a and YccA, and also cytoplasmic proteins sigma-32, LpxC, KdtA and phage lambda cII protein among others. Degrades membrane proteins in a processive manner starting at either the N- or C-terminus; recognition requires a cytoplasmic tail of about 20 residues with no apparent sequence requirements. It presumably dislocates membrane-spanning and periplasmic segments of the protein into the cytoplasm to degrade them, this probably requires ATP. Degrades C-terminal-tagged cytoplasmic proteins which are tagged with an 11-amino-acid nonpolar destabilizing tail via a mechanism involving the 10SA (SsrA) stable RNA. Ref.9 Ref.10 Ref.17 Ref.25 As FtsH regulates the levels of both LpxC and KdtA it is required for synthesis of both the protein and lipid components of lipopolysaccharide (LPS). Ref.9 Ref.10 Ref.17 Ref.25 |
| Cofactor | Binds 1 zinc ion per subunit. Requires ATP for protease catalytic activity, probably due to tight coupling of the 2 activities; ADP or non-hydrolyzable analogs cannot substitute, except when unfolded, non-physiological substrates are tested. |
| Enzyme regulation | Activity against phage lambda cII protein is inhibited by EDTA but not by PMSF. In vitro pre-incubation of FtsH with HflKC abolishes its activity against phage lambda cII protein; Cytoplasmic side. Ref.12 |
| Subunit structure | The E.coli AAA domain has been modeled as a homohexamer, in Thermus thermophilus the same domain crystallizes as a homohexamer. Forms a complex with HflKC (formerly called HflA); complex formation is stimulated by ATP. Interacts with YccA, and probably weakly with QmcA. Can be cross-linked to YidC (OxaA) and to a nascent polypeptide chain for an integral membrane protein. Ref.11 Ref.12 Ref.14 Ref.23 Ref.24 |
| Subcellular location | Cell inner membrane; Multi-pass membrane protein Ref.5 Ref.11 Ref.22. |
| Disruption phenotype | Lethality, due to increased levels of LpxC, which increases the level of LPS in the cell and results in formation of abnormal membrane structures in the periplasm. Lethality is suppressed under conditions in which LPS synthesis is reduced. Ref.17 |
| Miscellaneous | The ftsH gene was discovered independently through 3 different phenotypes and received 3 different names: ftsH, for filamentous temperature-sensitive; tolZ, for colicin tolerance, and hlfB, because mutants show a high frequency of lysogenization when infected with phage lambda (Ref.29). HAMAP MF_01458 |
| Sequence similarities | In the central section; belongs to the AAA ATPase family. In the C-terminal section; belongs to the peptidase M41 family. |
| Caution | Glu-476 was identified as the third Zn ligand (Ref.19), however in other crystal structures (Aquifex aeolicus and Thermotoga maritima) the conserved equivalent residue does not bind Zn. Instead it makes a hydrogen bond with the side chain of the first catalytic Zn-binding residue and indirectly stabilizes the Zn. |
| Sequence caution | The sequence AAA97508.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 644 | 644 | ATP-dependent zinc metalloprotease FtsH HAMAP MF_01458 | PRO_0000084631 | |||||||||||||||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 1 – 4 | 4 | Cytoplasmic Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 5 – 25 | 21 | Helical; Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 26 – 98 | 73 | Periplasmic Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 99 – 119 | 21 | Helical; Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 120 – 644 | 525 | Cytoplasmic Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Nucleotide binding | 192 – 199 | 8 | ATP Potential | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sites | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Active site | 415 | 1 | Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 414 | 1 | Zinc; catalytic Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 418 | 1 | Zinc; catalytic Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 492 | 1 | Zinc; catalytic By similarity | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Site | 225 | 1 | Substrate binding Probable | ||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 201 | 1 | L → N: No in vivo protease activity, no in vitro ATPase activity. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 225 | 1 | F → A, D, E, G, N, Q, R, S or T: Does not complement ftsH1 at 42 degrees Celsius, no protease activity in vivo. Ref.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 225 | 1 | F → C or H: Partially complements ftsH1 at 42 degrees Celsius, some protease activity in vivo. Ref.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 225 | 1 | F → I, L, M, V, W or Y: Complements ftsH1 at 42 degrees Celsius, restores protease activity in vivo. Ref.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 227 | 1 | G → A: Does not complement ftsH1 at 42 degrees Celsius, no protease activity in vivo. Ref.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 297 | 1 | T → A: Low protease activity in vivo, low ATPase activity in vitro, complements ftsH1 at 42 degrees Celsius. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 298 | 1 | N → A: No in vivo protease activity. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 304 | 1 | D → A or N: No in vivo protease activity, no in vitro ATPase activity; probably still binds ATP. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 304 | 1 | D → E: Low protease activity in vivo, low ATPase activity in vitro, complements ftsH1 at 42 degrees Celsius. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 307 | 1 | L → A: Low protease activity in vivo. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 309 | 1 | R → A, L or K: No in vivo protease activity, no ATPase activity in vitro; probably still binds ATP. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 312 | 1 | R → A, L or K: No in vivo protease activity, no ATPase activity in vitro; probably still binds ATP. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 414 – 418 | 5 | HEAGH → KEAGK: Loss of protease function. Ref.16 Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 414 | 1 | H → Y: Loss of protease function. Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 415 | 1 | E → Q: Loss of protease activity in vivo. Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 418 | 1 | H → Y in tolZ21; loss of protease function in vivo, retains about 25% ATPase activity, temperature sensitive. Ref.16 Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 463 | 1 | E → K in ftsH1; a temperature-sensitive mutant which increases the frequency of lysogenization of phage lambda; when associated with A-587. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 476 | 1 | E → D, K or V: Severe loss of protease function that is restored by excess Zn. Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 476 | 1 | E → Q: Little effect on protease function. Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 536 | 1 | H → R in hflB29; increases the frequency of lysogenization of phage lambda. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 582 | 1 | E → D, K or Q: No effect on protease function. Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 582 | 1 | E → V: Decreased protease function. Ref.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 142 – 147 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 151 – 153 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 158 – 163 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 165 – 172 | 8 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 174 – 176 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 187 – 191 | 5 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 198 – 209 | 12 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 213 – 216 | 4 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 230 – 241 | 12 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 245 – 250 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 253 – 256 | 4 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 270 – 283 | 14 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 287 – 289 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 291 – 298 | 8 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 300 – 302 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 305 – 308 | 4 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 315 – 318 | 4 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 324 – 335 | 12 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 346 – 351 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 358 – 374 | 17 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 378 – 380 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 382 – 392 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The Escherichia coli FtsH protein is a prokaryotic member of a protein family of putative ATPases involved in membrane functions, cell cycle control, and gene expression." Tomoyasu T., Yuki T., Morimura S., Mori H., Yamanaka K., Niki H., Hiraga S., Ogura T. J. Bacteriol. 175:1344-1351(1993) [PubMed: 8444796] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], MUTAGENESIS OF GLU-463 AND HIS-536. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
| [2] | "Identification and physical analysis of new genes in the argG region (69 min) of Escherichia coli chromosome." Wang R., Kushner S.R. Submitted (SEP-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12. |
| [3] | "The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076. |
| [4] | "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
| [5] | "Topology and subcellular localization of FtsH protein in Escherichia coli." Tomoyasu T., Yamanaka K., Murata K., Suzaki T., Bouloc P., Kato A., Niki H., Hiraga S., Ogura T. J. Bacteriol. 175:1352-1357(1993) [PubMed: 8444797] [Abstract] Cited for: SUBCELLULAR LOCATION, TOPOLOGY. Strain: K12 / W3110 / ATCC 27325 / DSM 5911. |
| [6] | "Structure and function of the ftsH gene in Escherichia coli." Ogura T., Tomoyasu T., Yuki T., Morimura S., Begg K.J., Donachie W.D., Mori H., Niki H., Hiraga S. Res. Microbiol. 142:279-282(1991) [PubMed: 1925026] [Abstract] Cited for: DISCUSSION OF SEQUENCE. |
| [7] | "Cell growth and lambda phage development controlled by the same essential Escherichia coli gene, ftsH/hflB." Herman C., Ogura T., Tomoyasu T., Hiraga S., Akiyama Y., Ito K., Thomas R., D'Ari R., Bouloc P. Proc. Natl. Acad. Sci. U.S.A. 90:10861-10865(1993) [PubMed: 8248182] [Abstract] Cited for: IDENTIFICATION OF HFLB AS FTSH. |
| [8] | "Involvement of FtsH in protein assembly into and through the membrane. II. Dominant mutations affecting FtsH functions." Akiyama Y., Shirai Y., Ito K. J. Biol. Chem. 269:5225-5229(1994) [PubMed: 8106505] [Abstract] Cited for: CHARACTERIZATION. |
| [9] | "Escherichia coli FtsH is a membrane-bound, ATP-dependent protease which degrades the heat-shock transcription factor sigma 32." Tomoyasu T., Gamer J., Bukau B., Kanemori M., Mori H., Rutman A.J., Oppenheim A.B., Yura T., Yamanaka K., Niki H., Hiraga S., Ogura T. EMBO J. 14:2551-2560(1995) [PubMed: 7781608] [Abstract] Cited for: FUNCTION, SIGMA-32 AS SUBSTRATE. |
| [10] | "FtsH is required for proteolytic elimination of uncomplexed forms of SecY, an essential protein translocase subunit." Kihara A., Akiyama Y., Ito K. Proc. Natl. Acad. Sci. U.S.A. 92:4532-4536(1995) [PubMed: 7753838] [Abstract] Cited for: FUNCTION, SECY AS SUBSTRATE. |
| [11] | "A protease complex in the Escherichia coli plasma membrane: HflKC (HflA) forms a complex with FtsH (HflB), regulating its proteolytic activity against SecY." Kihara A., Akiyama Y., Ito K. EMBO J. 15:6122-6131(1996) [PubMed: 8947034] [Abstract] Cited for: INTERACTION WITH HFLC AND HFLK, SUBCELLULAR LOCATION. Strain: K12 / CSH26 / AD16. |
| [12] | "Host regulation of lysogenic decision in bacteriophage lambda: transmembrane modulation of FtsH (HflB), the cII degrading protease, by HflKC (HflA)." Kihara A., Akiyama Y., Ito K. Proc. Natl. Acad. Sci. U.S.A. 94:5544-5549(1997) [PubMed: 9159109] [Abstract] Cited for: ENZYME REGULATION, INTERACTION WITH HFLKC. Strain: K12 / CSH26 / AD16. |
| [13] | "Degradation of carboxy-terminal-tagged cytoplasmic proteins by the Escherichia coli protease HflB (FtsH)." Herman C., Thevenet D., Bouloc P., Walker G.C., D'Ari R. Genes Dev. 12:1348-1355(1998) [PubMed: 9573051] [Abstract] Cited for: CHARACTERIZATION. |
| [14] | "Different pathways for protein degradation by the FtsH/HflKC membrane-embedded protease complex: an implication from the interference by a mutant form of a new substrate protein, YccA." Kihara A., Akiyama Y., Ito K. J. Mol. Biol. 279:175-188(1998) [PubMed: 9636708] [Abstract] Cited for: MEMBRANE SUBSTRATES, INTERACTION WITH YCCA. Strain: K12 / CSH26 / AD16. |
| [15] | "Dislocation of membrane proteins in FtsH-mediated proteolysis." Kihara A., Akiyama Y., Ito K. EMBO J. 18:2970-2981(1999) [PubMed: 10357810] [Abstract] Cited for: MECHANISM OF MEMBRANE SUBSTRATE RECOGNITION. Strain: K12 / CSH26 / AD16. |
| [16] | "Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases. Site-directed mutagenesis of the ATP-dependent protease FtsH." Karata K., Inagawa T., Wilkinson A.J., Tatsuta T., Ogura T. J. Biol. Chem. 274:26225-26232(1999) [PubMed: 10473576] [Abstract] Cited for: MUTAGENESIS OF LYS-201; THR-297; ASN-298; ASP-304; LEU-307; ARG-309; ARG-312; GLN-415 AND HIS-418. |
| [17] | "Balanced biosynthesis of major membrane components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH (HflB) in Escherichia coli." Ogura T., Inoue K., Tatsuta T., Suzaki T., Karata K., Young K., Su L.H., Fierke C.A., Jackman J.E., Raetz C.R., Coleman J., Tomoyasu T., Matsuzawa H. Mol. Microbiol. 31:833-844(1999) [PubMed: 10048027] [Abstract] Cited for: LPXC AS SUBSTRATE, FUNCTION IN REGULATING LIPOPOLYSACCHARIDE SYNTHESIS, DISRUPTION PHENOTYPE. Strain: K12 / W3110 and W2252. |
| [18] | "Length recognition at the N-terminal tail for the initiation of FtsH-mediated proteolysis." Chiba S., Akiyama Y., Mori H., Matsuo E., Ito K. EMBO Rep. 1:47-52(2000) [PubMed: 11256624] [Abstract] Cited for: RECOGNITION OF MEMBRANE SUBSTRATE FROM N-TERMINUS. |
| [19] | "Identification of glutamic acid 479 as the gluzincin coordinator of zinc in FtsH (HflB)." Saikawa N., Ito K., Akiyama Y. Biochemistry 41:1861-1868(2002) [PubMed: 11827531] [Abstract] Cited for: ZINC-BINDING, MUTAGENESIS OF HIS-414; HIS-418; GLU-476 AND GLU-582. Strain: K12. |
| [20] | "Membrane protein degradation by FtsH can be initiated from either end." Chiba S., Akiyama Y., Ito K. J. Bacteriol. 184:4775-4782(2002) [PubMed: 12169602] [Abstract] Cited for: RECOGNITION OF MEMBRANE SUBSTRATE FROM C-TERMINUS. Strain: K12 / JM103. |
| [21] | "Conserved pore residues in the AAA protease FtsH are important for proteolysis and its coupling to ATP hydrolysis." Yamada-Inagawa T., Okuno T., Karata K., Yamanaka K., Ogura T. J. Biol. Chem. 278:50182-50187(2003) [PubMed: 14514680] [Abstract] Cited for: REQUIREMENT FOR ATP, MUTAGENESIS OF PHE-225 AND GLY-227. |
| [22] | "Global topology analysis of the Escherichia coli inner membrane proteome." Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G. Science 308:1321-1323(2005) [PubMed: 15919996] [Abstract] Cited for: SUBCELLULAR LOCATION. Strain: K12 / MG1655 / ATCC 47076. |
| [23] | "The Escherichia coli plasma membrane contains two PHB (prohibitin homology) domain protein complexes of opposite orientations." Chiba S., Ito K., Akiyama Y. Mol. Microbiol. 60:448-457(2006) [PubMed: 16573693] [Abstract] Cited for: POSSIBLE INTERACTION WITH QMCA. Strain: K12. |
| [24] | "Detection of cross-links between FtsH, YidC, HflK/C suggests a linked role for these proteins in quality control upon insertion of bacterial inner membrane proteins." van Bloois E., Dekker H.L., Froderberg L., Houben E.N., Urbanus M.L., de Koster C.G., de Gier J.W., Luirink J. FEBS Lett. 582:1419-1424(2008) [PubMed: 18387365] [Abstract] Cited for: INTERACTION WITH YIDC (OXAA). |
| [25] | "Dual role of FtsH in regulating lipopolysaccharide biosynthesis in Escherichia coli." Katz C., Ron E.Z. J. Bacteriol. 190:7117-7122(2008) [PubMed: 18776015] [Abstract] Cited for: KDO TRANSFERASE (KDTA) AS SUBSTRATE, FUNCTION IN REGULATING LIPOPOLYSACCHARIDE BIOSYNTHESIS. Strain: K12 / MG1655 / ATCC 47076. |
| [26] | "Crystallization of the AAA domain of the ATP-dependent protease FtsH of Escherichia coli." Krzywda S., Brzozowski A.M., Karata K., Ogura T., Wilkinson A.J. Acta Crystallogr. D 582:1066-1067(2002) [PubMed: 12037319] [Abstract] Cited for: PRELIMINARY CRYSTALLIZATION. |
| [27] | "The crystal structure of the AAA domain of the ATP-dependent protease FtsH of Escherichia coli at 1.5 A resolution." Krzywda S., Brzozowski A.M., Verma C., Karata K., Ogura T., Wilkinson A.J. Structure 10:1073-1083(2002) [PubMed: 12176385] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.5 ANGSTROMS) OF 141-395. |
| [28] | "Quality control of cytoplasmic membrane proteins in Escherichia coli." Akiyama Y. J. Biochem. 146:449-454(2009) [PubMed: 19454621] [Abstract] Cited for: REVIEW. |
| [29] | "Degradation of cytoplasmic substrates by FtsH, a membrane-anchored protease with many talents." Narberhaus F., Obrist M., Fuhrer F., Langklotz S. Res. Microbiol. 160:652-659(2009) [PubMed: 19744556] [Abstract] Cited for: REVIEW. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | M83138 Genomic DNA. Translation: AAA23813.1. U01376 Genomic DNA. Translation: AAA97508.1. Different initiation. U18997 Genomic DNA. Translation: AAA57979.1. U00096 Genomic DNA. Translation: AAC76210.1. AP009048 Genomic DNA. Translation: BAE77222.1. | ||||||||||||
| PIR | S35109. | ||||||||||||
| RefSeq | NP_417645.1. NC_000913.2. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | P0AAI3. | ||||||||||||
| SMR | P0AAI3. Positions 139-602. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| DIP | DIP-35828N. | ||||||||||||
| IntAct | P0AAI3. 26 interactions. | ||||||||||||
| MINT | MINT-1226643. | ||||||||||||
Protein family/group databases | |||||||||||||
| MEROPS | M41.001. | ||||||||||||
Proteomic databases | |||||||||||||
| PRIDE | P0AAI3. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| EnsemblBacteria | EBESCT00000000369; EBESCP00000000369; EBESCG00000195129. EBESCT00000000370; EBESCP00000000370; EBESCG00000195129. EBESCT00000017485; EBESCP00000016776; EBESCG00000016541. | ||||||||||||
| GeneID | 947690. | ||||||||||||
| GenomeReviews | Gene locus JW3145 in contig AP009048_GR. Gene locus b3178 in contig U00096_GR. | ||||||||||||
| KEGG | ecj:JW3145. eco:b3178. | ||||||||||||
| PATRIC | 32121774. VBIEscCol129921_3271. | ||||||||||||
Organism-specific databases | |||||||||||||
| EchoBASE | EB1469. | ||||||||||||
| EcoGene | EG11506. ftsH. | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | COG0465. | ||||||||||||
| GeneTree | EBGT00050000009542. | ||||||||||||
| HOGENOM | HBG724153. | ||||||||||||
| OMA | TYIPVND. | ||||||||||||
| PhylomeDB | P0AAI3. | ||||||||||||
| ProtClustDB | PRK10733. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BioCyc | EcoCyc:EG11506-MONOMER. MetaCyc:EG11506-MONOMER. | ||||||||||||
Gene expression databases | |||||||||||||
| Genevestigator | P0AAI3. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_01458. FtsH. [Tree] | ||||||||||||
| InterPro | IPR003593. ATPase_AAA+_core. IPR003959. ATPase_AAA_core. IPR003960. ATPase_AAA_CS. IPR005936. Pept_M41_FtsH. IPR011546. Pept_M41_FtsH_extracell. IPR000642. Peptidase_M41. [Graphical view] | ||||||||||||
| KO | K03798. | ||||||||||||
| Pfam | PF00004. AAA. 1 hit. PF06480. FtsH_ext. 1 hit. PF01434. Peptidase_M41. 1 hit. [Graphical view] | ||||||||||||
| SMART | SM00382. AAA. 1 hit. [Graphical view] | ||||||||||||
| TIGRFAMs | TIGR01241. FtsH_fam. 1 hit. | ||||||||||||
| PROSITE | PS00674. AAA. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | FTSH_ECOLI | ||||||||
| Accession | Primary (citable) accession number: P0AAI3 Secondary accession number(s): P28691, Q2M934 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Peptidase families Classification of peptidase families and list of entries |
| Escherichia coli Escherichia coli (strain K12): entries and cross-references to EcoGene |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with