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Protein

Putative arginine/ornithine antiporter

Gene

ydgI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway.By similarity

GO - Molecular functioni

Keywordsi

Biological processAmino-acid transport, Antiport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:ARCD-MONOMER.

Protein family/group databases

TCDBi2.A.3.2.8. the amino acid-polyamine-organocation (apc) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative arginine/ornithine antiporter
Gene namesi
Name:ydgI
Ordered Locus Names:b1605, JW1597
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13930. ydgI.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 4CytoplasmicSequence analysis4
Transmembranei5 – 25HelicalSequence analysisAdd BLAST21
Topological domaini26 – 38PeriplasmicSequence analysisAdd BLAST13
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Topological domaini60 – 92CytoplasmicSequence analysisAdd BLAST33
Transmembranei93 – 113HelicalSequence analysisAdd BLAST21
Topological domaini114 – 125PeriplasmicSequence analysisAdd BLAST12
Transmembranei126 – 146HelicalSequence analysisAdd BLAST21
Topological domaini147 – 157CytoplasmicSequence analysisAdd BLAST11
Transmembranei158 – 178HelicalSequence analysisAdd BLAST21
Topological domaini179 – 201PeriplasmicSequence analysisAdd BLAST23
Transmembranei202 – 222HelicalSequence analysisAdd BLAST21
Topological domaini223 – 235CytoplasmicSequence analysisAdd BLAST13
Transmembranei236 – 256HelicalSequence analysisAdd BLAST21
Topological domaini257 – 282PeriplasmicSequence analysisAdd BLAST26
Transmembranei283 – 303HelicalSequence analysisAdd BLAST21
Topological domaini304 – 331CytoplasmicSequence analysisAdd BLAST28
Transmembranei332 – 352HelicalSequence analysisAdd BLAST21
Topological domaini353 – 357PeriplasmicSequence analysis5
Transmembranei358 – 378HelicalSequence analysisAdd BLAST21
Topological domaini379 – 384CytoplasmicSequence analysis6
Transmembranei385 – 405HelicalSequence analysisAdd BLAST21
Transmembranei406 – 426HelicalSequence analysisAdd BLAST21
Topological domaini427 – 439PeriplasmicSequence analysisAdd BLAST13
Transmembranei440 – 460HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000542411 – 460Putative arginine/ornithine antiporterAdd BLAST460

Proteomic databases

PaxDbiP0AAE5.
PRIDEiP0AAE5.

Interactioni

Protein-protein interaction databases

BioGridi4259127. 249 interactors.
DIPiDIP-48049N.
IntActiP0AAE5. 1 interactor.
STRINGi316385.ECDH10B_1738.

Structurei

3D structure databases

ProteinModelPortaliP0AAE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105D5Q. Bacteria.
COG0531. LUCA.
HOGENOMiHOG000164505.
InParanoidiP0AAE5.
KOiK03758.
PhylomeDBiP0AAE5.

Family and domain databases

InterProiView protein in InterPro
IPR002293. AA/rel_permease1.
IPR004754. Amino_acid_antiprt.
PfamiView protein in Pfam
PF13520. AA_permease_2. 1 hit.
PIRSFiPIRSF006060. AA_transporter. 1 hit.
TIGRFAMsiTIGR00905. 2A0302. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AAE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKKLGLSAL TALVLSSMLG AGVFSLPQNM AAVASPAALL IGWGITGAGI
60 70 80 90 100
LLLAFAMLIL TRIRPELDGG IFTYAREGFG ELIGFCSAWG YWLCAVIANV
110 120 130 140 150
SYLVIVFSAL SFFTDTPELR LFGDGNTWQS IVGASALLWI VHFLILRGVQ
160 170 180 190 200
TAASINLVAT LAKLLPLGLF VVLAMMMFKL DTFKLDFTGL ALGVPVWEQV
210 220 230 240 250
KNTMLITLWV FIGVEGAVVV SARARNKRDV GKATLLAVLS ALGVYLLVTL
260 270 280 290 300
LSLGVVARPE LAEIRNPSMA GLMVEMMGPW GEIIIAAGLI VSVCGAYLSW
310 320 330 340 350
TIMAAEVPFL AATHKAFPRI FARQNAQAAP SASLWLTNIC VQICLVLIWL
360 370 380 390 400
TGSDYNTLLT IASEMILVPY FLVGAFLLKI ATRPLHKAVG VGACIYGLWL
410 420 430 440 450
LYASGPMHLL LSVVLYAPGL LVFLYARKTH THDNVLNRQE MVLIGMLLIA
460
SVPATWMLVG
Length:460
Mass (Da):49,501
Last modified:October 11, 2005 - v1
Checksum:i4E0FE8E1861FA1B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74677.1.
AP009048 Genomic DNA. Translation: BAA15343.1.
PIRiG64916.
RefSeqiNP_416122.1. NC_000913.3.
WP_000412379.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74677; AAC74677; b1605.
BAA15343; BAA15343; BAA15343.
GeneIDi945159.
KEGGiecj:JW1597.
eco:b1605.
PATRICifig|1411691.4.peg.657.

Similar proteinsi

Entry informationi

Entry nameiARCD_ECOLI
AccessioniPrimary (citable) accession number: P0AAE5
Secondary accession number(s): P77429
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: August 30, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families