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Protein

Putative sulfur carrier protein YedF

Gene

yedF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei17Cysteine persulfide intermediateBy similarity1

GO - Biological processi

  • cellular chemical homeostasis Source: GO_Central
  • cellular response to DNA damage stimulus Source: EcoliWiki

Enzyme and pathway databases

BioCyciEcoCyc:EG11661-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative sulfur carrier protein YedF
Gene namesi
Name:yedF
Ordered Locus Names:b1930, JW1915
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11661 yedF

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001590621 – 77Putative sulfur carrier protein YedFAdd BLAST77

Proteomic databases

PaxDbiP0AA31
PRIDEiP0AA31

Interactioni

Protein-protein interaction databases

BioGridi4261059, 7 interactors
IntActiP0AA31, 4 interactors
STRINGi316385.ECDH10B_2071

Structurei

Secondary structure

177
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 10Combined sources5
Beta strandi16 – 20Combined sources5
Helixi22 – 27Combined sources6
Turni28 – 30Combined sources3
Beta strandi36 – 42Combined sources7
Beta strandi44 – 47Combined sources4
Helixi49 – 57Combined sources9
Beta strandi60 – 66Combined sources7
Beta strandi68 – 76Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1JE3NMR-A1-77[»]
ProteinModelPortaliP0AA31
SMRiP0AA31
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0AA31

Family & Domainsi

Sequence similaritiesi

Belongs to the sulfur carrier protein TusA family.Curated

Phylogenomic databases

eggNOGiCOG0425 LUCA
HOGENOMiHOG000259289
InParanoidiP0AA31
OMAiVCPYPQL
PhylomeDBiP0AA31

Family and domain databases

Gene3Di3.30.110.40, 1 hit
InterProiView protein in InterPro
IPR001455 TusA-like
IPR036868 TusA-like_sf
PfamiView protein in Pfam
PF01206 TusA, 1 hit
SUPFAMiSSF64307 SSF64307, 1 hit
PROSITEiView protein in PROSITE
PS01148 UPF0033, 1 hit

Sequencei

Sequence statusi: Complete.

P0AA31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNIVPDYRL DMVGEPCPYP AVATLEAMPQ LKKGEILEVV SDCPQSINNI
60 70
PLDARNHGYT VLDIQQDGPT IRYLIQK
Length:77
Mass (Da):8,639
Last modified:September 13, 2005 - v1
Checksum:i40E393E76CC54AB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L13279 Genomic DNA Translation: AAA82578.1
U00096 Genomic DNA Translation: AAC74997.1
AP009048 Genomic DNA Translation: BAA15758.1
PIRiG64956
RefSeqiNP_416440.1, NC_000913.3
WP_000790504.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74997; AAC74997; b1930
BAA15758; BAA15758; BAA15758
GeneIDi23338749
946909
KEGGiecj:JW1915
eco:b1930
PATRICifig|511145.12.peg.2012

Similar proteinsi

Entry informationi

Entry nameiYEDF_ECOLI
AccessioniPrimary (citable) accession number: P0AA31
Secondary accession number(s): P31065
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 25, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

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