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Protein

Uncharacterized HTH-type transcriptional regulator YiaG

Gene

yiaG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi49 – 68H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:EG12624-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YiaG
Gene namesi
Name:yiaG
Ordered Locus Names:b3555, JW3524
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12624 yiaG

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001497661 – 96Uncharacterized HTH-type transcriptional regulator YiaGAdd BLAST96

Proteomic databases

PaxDbiP0A9V5
PRIDEiP0A9V5

Interactioni

Protein-protein interaction databases

BioGridi4262532, 9 interactors
IntActiP0A9V5, 6 interactors
STRINGi316385.ECDH10B_3734

Structurei

3D structure databases

ProteinModelPortaliP0A9V5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 91HTH cro/C1-typePROSITE-ProRule annotationAdd BLAST54

Phylogenomic databases

eggNOGiENOG4105MVF Bacteria
COG2944 LUCA
HOGENOMiHOG000265486
KOiK07726
OMAiMAMPEPQ

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

P0A9V5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYKDPMHEL LSSLEQIVFK DETQKITLTH RTTSCTEIEQ LRKGTGLKID
60 70 80 90
DFARVLGVSV AMVKEWESRR VKPSSAELKL MRLIQANPAL SKQLME
Length:96
Mass (Da):11,033
Last modified:July 19, 2005 - v1
Checksum:iA0BC34F733957268
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M30139 Genomic DNA No translation available.
U00039 Genomic DNA Translation: AAB18532.1
U00096 Genomic DNA Translation: AAC76579.1
AP009048 Genomic DNA Translation: BAE77740.1
PIRiS47776
RefSeqiNP_418011.1, NC_000913.3
WP_000455798.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76579; AAC76579; b3555
BAE77740; BAE77740; BAE77740
GeneIDi948071
KEGGiecj:JW3524
eco:b3555
PATRICifig|1411691.4.peg.3159

Entry informationi

Entry nameiYIAG_ECOLI
AccessioniPrimary (citable) accession number: P0A9V5
Secondary accession number(s): P37668, Q2M7L6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: March 28, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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