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Protein

Uncharacterized HTH-type transcriptional regulator YiaG

Gene

yiaG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi49 – 68H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG12624-MONOMER.
ECOL316407:JW3524-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YiaG
Gene namesi
Name:yiaG
Ordered Locus Names:b3555, JW3524
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12624. yiaG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001497661 – 96Uncharacterized HTH-type transcriptional regulator YiaGAdd BLAST96

Proteomic databases

PaxDbiP0A9V5.
PRIDEiP0A9V5.

Interactioni

Protein-protein interaction databases

BioGridi4262532. 9 interactors.
IntActiP0A9V5. 6 interactors.
STRINGi511145.b3555.

Structurei

3D structure databases

ProteinModelPortaliP0A9V5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 91HTH cro/C1-typePROSITE-ProRule annotationAdd BLAST54

Sequence similaritiesi

Contains 1 HTH cro/C1-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105MVF. Bacteria.
COG2944. LUCA.
HOGENOMiHOG000265486.
KOiK07726.
OMAiMAMPEPQ.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A9V5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYKDPMHEL LSSLEQIVFK DETQKITLTH RTTSCTEIEQ LRKGTGLKID
60 70 80 90
DFARVLGVSV AMVKEWESRR VKPSSAELKL MRLIQANPAL SKQLME
Length:96
Mass (Da):11,033
Last modified:July 19, 2005 - v1
Checksum:iA0BC34F733957268
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M30139 Genomic DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18532.1.
U00096 Genomic DNA. Translation: AAC76579.1.
AP009048 Genomic DNA. Translation: BAE77740.1.
PIRiS47776.
RefSeqiNP_418011.1. NC_000913.3.
WP_000455798.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76579; AAC76579; b3555.
BAE77740; BAE77740; BAE77740.
GeneIDi948071.
KEGGiecj:JW3524.
eco:b3555.
PATRICi32122582. VBIEscCol129921_3668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M30139 Genomic DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18532.1.
U00096 Genomic DNA. Translation: AAC76579.1.
AP009048 Genomic DNA. Translation: BAE77740.1.
PIRiS47776.
RefSeqiNP_418011.1. NC_000913.3.
WP_000455798.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A9V5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262532. 9 interactors.
IntActiP0A9V5. 6 interactors.
STRINGi511145.b3555.

Proteomic databases

PaxDbiP0A9V5.
PRIDEiP0A9V5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76579; AAC76579; b3555.
BAE77740; BAE77740; BAE77740.
GeneIDi948071.
KEGGiecj:JW3524.
eco:b3555.
PATRICi32122582. VBIEscCol129921_3668.

Organism-specific databases

EchoBASEiEB2508.
EcoGeneiEG12624. yiaG.

Phylogenomic databases

eggNOGiENOG4105MVF. Bacteria.
COG2944. LUCA.
HOGENOMiHOG000265486.
KOiK07726.
OMAiMAMPEPQ.

Enzyme and pathway databases

BioCyciEcoCyc:EG12624-MONOMER.
ECOL316407:JW3524-MONOMER.

Miscellaneous databases

PROiP0A9V5.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIAG_ECOLI
AccessioniPrimary (citable) accession number: P0A9V5
Secondary accession number(s): P37668, Q2M7L6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 2, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.