Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized ABC transporter ATP-binding protein YbhF

Gene

ybhF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi40 – 47ATP 1PROSITE-ProRule annotation8
Nucleotide bindingi362 – 369ATP 2PROSITE-ProRule annotation8

GO - Molecular functioni

  • ATPase activity Source: InterPro
  • ATP binding Source: UniProtKB-KW
  • efflux transmembrane transporter activity Source: EcoCyc

GO - Biological processi

  • drug transmembrane transport Source: EcoCyc

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YBHF-MONOMER.

Protein family/group databases

TCDBi3.A.1.105.15. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YbhF
Gene namesi
Name:ybhF
Ordered Locus Names:b0794, JW5104
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13314. ybhF.

Subcellular locationi

GO - Cellular componenti

  • plasma membrane Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931561 – 578Uncharacterized ABC transporter ATP-binding protein YbhFAdd BLAST578

Proteomic databases

PaxDbiP0A9U1.
PRIDEiP0A9U1.

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi4261836. 11 interactors.
DIPiDIP-48149N.
IntActiP0A9U1. 7 interactors.
MINTiMINT-1249856.
STRINGi316385.ECDH10B_0862.

Structurei

3D structure databases

ProteinModelPortaliP0A9U1.
SMRiP0A9U1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 237ABC transporter 1PROSITE-ProRule annotationAdd BLAST232
Domaini330 – 559ABC transporter 2PROSITE-ProRule annotationAdd BLAST230

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105CJ1. Bacteria.
COG1131. LUCA.
HOGENOMiHOG000014887.
InParanoidiP0A9U1.
KOiK01990.
PhylomeDBiP0A9U1.

Family and domain databases

InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00005. ABC_tran. 2 hits.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.

Sequencei

Sequence statusi: Complete.

P0A9U1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM
60 70 80 90 100
RMLAGLLKPD SGSATVIGFD PIKNDGALHA VLGYMPQKFG LYEDLTVMEN
110 120 130 140 150
LNLYADLRSV TGEARKQTFA RLLEFTSLGP FTGRLAGKLS GGMKQKLGLA
160 170 180 190 200
CTLVGEPKVL LLDEPGVGVD PISRRELWQM VHELAGEGML ILWSTSYLDE
210 220 230 240 250
AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMTSPHE GNRKLLQRAL
260 270 280 290 300
KLPQVSDGMI QGKSVRLILK KEATPDDIRH ADGMPEININ ETTPRFEDAF
310 320 330 340 350
IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF
360 370 380 390 400
AVKRGEIFGL LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA
410 420 430 440 450
RQHLGYMAQK FSLYGNLTVE QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL
460 470 480 490 500
KSIASHATDE LPLGFKQRLA LACSLMHEPD ILFLDEPTSG VDPLTRREFW
510 520 530 540 550
LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS GTPDDLKAQS
560 570
ANDEQPDPTM EQAFIQLIHD WDKEHSNE
Length:578
Mass (Da):63,132
Last modified:July 19, 2005 - v1
Checksum:iDB3B3FA213490F3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73881.2.
AP009048 Genomic DNA. Translation: BAA35454.2.
PIRiB64816.
RefSeqiNP_415315.4. NC_000913.3.
WP_000996107.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73881; AAC73881; b0794.
BAA35454; BAA35454; BAA35454.
GeneIDi945413.
KEGGiecj:JW5104.
eco:b0794.
PATRICifig|1411691.4.peg.1484.

Similar proteinsi

Entry informationi

Entry nameiYBHF_ECOLI
AccessioniPrimary (citable) accession number: P0A9U1
Secondary accession number(s): P75776, Q9R7S3, Q9R7S4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 25, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families