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Protein

Uncharacterized ABC transporter ATP-binding protein YbbA

Gene

ybbA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi43 – 50ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YBBA-MONOMER.
ECOL316407:JW0484-MONOMER.

Protein family/group databases

TCDBi3.A.1.122.15. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YbbA
Gene namesi
Name:ybbA
Ordered Locus Names:b0495, JW0484
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11657. ybbA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931521 – 228Uncharacterized ABC transporter ATP-binding protein YbbAAdd BLAST228

Proteomic databases

PaxDbiP0A9T8.
PRIDEiP0A9T8.

Interactioni

Protein-protein interaction databases

BioGridi4259855. 7 interactors.
IntActiP0A9T8. 2 interactors.
MINTiMINT-1283721.
STRINGi511145.b0495.

Structurei

3D structure databases

ProteinModelPortaliP0A9T8.
SMRiP0A9T8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 228ABC transporterPROSITE-ProRule annotationAdd BLAST222

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated
Contains 1 ABC transporter domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108I0Y. Bacteria.
COG4181. LUCA.
InParanoidiP0A9T8.
KOiK02003.
OMAiGGEVNIL.
PhylomeDBiP0A9T8.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A9T8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAENIVEVH HLKKSVGQGE HELSILTGVE LVVKRGETIA LVGESGSGKS
60 70 80 90 100
TLLAILAGLD DGSSGEVSLV GQPLHNMDEE ARAKLRAKHV GFVFQSFMLI
110 120 130 140 150
PTLNALENVE LPALLRGESS AESRNGAKAL LEQLGLGKRL DHLPAQLSGG
160 170 180 190 200
EQQRVALARA FNGRPDVLFA DEPTGNLDRQ TGDKIADLLF SLNREHGTTL
210 220
IMVTHDLQLA ARCDRCLRLV NGQLQEEA
Length:228
Mass (Da):24,533
Last modified:July 19, 2005 - v1
Checksum:i29F01E8959BB7927
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti88 – 89KH → ND in L06182 (PubMed:8098033).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40249.1.
U00096 Genomic DNA. Translation: AAC73597.1.
AP009048 Genomic DNA. Translation: BAE76274.1.
L06182 Genomic DNA. No translation available.
PIRiF64780.
RefSeqiNP_415028.1. NC_000913.3.
WP_001110573.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73597; AAC73597; b0495.
BAE76274; BAE76274; BAE76274.
GeneIDi945122.
KEGGiecj:JW0484.
eco:b0495.
PATRICi32116149. VBIEscCol129921_0516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40249.1.
U00096 Genomic DNA. Translation: AAC73597.1.
AP009048 Genomic DNA. Translation: BAE76274.1.
L06182 Genomic DNA. No translation available.
PIRiF64780.
RefSeqiNP_415028.1. NC_000913.3.
WP_001110573.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A9T8.
SMRiP0A9T8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259855. 7 interactors.
IntActiP0A9T8. 2 interactors.
MINTiMINT-1283721.
STRINGi511145.b0495.

Protein family/group databases

TCDBi3.A.1.122.15. the atp-binding cassette (abc) superfamily.

Proteomic databases

PaxDbiP0A9T8.
PRIDEiP0A9T8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73597; AAC73597; b0495.
BAE76274; BAE76274; BAE76274.
GeneIDi945122.
KEGGiecj:JW0484.
eco:b0495.
PATRICi32116149. VBIEscCol129921_0516.

Organism-specific databases

EchoBASEiEB1609.
EcoGeneiEG11657. ybbA.

Phylogenomic databases

eggNOGiENOG4108I0Y. Bacteria.
COG4181. LUCA.
InParanoidiP0A9T8.
KOiK02003.
OMAiGGEVNIL.
PhylomeDBiP0A9T8.

Enzyme and pathway databases

BioCyciEcoCyc:YBBA-MONOMER.
ECOL316407:JW0484-MONOMER.

Miscellaneous databases

PROiP0A9T8.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBBA_ECOLI
AccessioniPrimary (citable) accession number: P0A9T8
Secondary accession number(s): P31219, P77322, Q2MBT2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 2, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.