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Protein

Prophage lysis protein S homolog EssD

Gene

essD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • cytolysis by virus of host cell Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Cytolysis, Host cell lysis by virus, Virus exit from host cell

Enzyme and pathway databases

BioCyciEcoCyc:G6309-MONOMER.
ECOL316407:JW0543-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Prophage lysis protein S homolog EssDCurated
Alternative name(s):
Lysis protein S homolog from lambdoid prophage DLP12
Gene namesi
Name:essD
Synonyms:ybcR
Ordered Locus Names:b0554, JW0543
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13634. essD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000776551 – 71Prophage lysis protein S homolog EssDAdd BLAST71

Proteomic databases

PaxDbiP0A9R2.
PRIDEiP0A9R2.

Interactioni

Protein-protein interaction databases

BioGridi4259884. 11 interactors.
STRINGi511145.b0554.

Structurei

3D structure databases

ProteinModelPortaliP0A9R2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lambda phage S protein family.Curated

Phylogenomic databases

eggNOGiENOG4105QFS. Bacteria.
ENOG4111XDG. LUCA.
HOGENOMiHOG000120019.
OMAiVMKSMDK.

Family and domain databases

InterProiIPR007054. Lysis_S.
[Graphical view]
PfamiPF04971. Phage_holin_2_1. 1 hit.
[Graphical view]
PIRSFiPIRSF030786. Lysis_S. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A9R2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSMDKLTTG VAYGTSAGSA GYWFLQLLDK VTPSQWAAIG VLGSLVFGLL
60 70
TYLTNLYFKI KEDKRKAARG E
Length:71
Mass (Da):7,778
Last modified:July 19, 2005 - v1
Checksum:i9C013E2FE4361843
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA. Translation: AAB40750.1.
U00096 Genomic DNA. Translation: AAC73655.1.
AP009048 Genomic DNA. Translation: BAE76329.1.
PIRiH64787.
RefSeqiNP_415086.1. NC_000913.3.
WP_000839596.1. NZ_CP014272.1.

Genome annotation databases

EnsemblBacteriaiAAC73655; AAC73655; b0554.
BAE76329; BAE76329; BAE76329.
GeneIDi947545.
KEGGiecj:JW0543.
eco:b0554.
PATRICi32116274. VBIEscCol129921_0577.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA. Translation: AAB40750.1.
U00096 Genomic DNA. Translation: AAC73655.1.
AP009048 Genomic DNA. Translation: BAE76329.1.
PIRiH64787.
RefSeqiNP_415086.1. NC_000913.3.
WP_000839596.1. NZ_CP014272.1.

3D structure databases

ProteinModelPortaliP0A9R2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259884. 11 interactors.
STRINGi511145.b0554.

Proteomic databases

PaxDbiP0A9R2.
PRIDEiP0A9R2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73655; AAC73655; b0554.
BAE76329; BAE76329; BAE76329.
GeneIDi947545.
KEGGiecj:JW0543.
eco:b0554.
PATRICi32116274. VBIEscCol129921_0577.

Organism-specific databases

EchoBASEiEB3398.
EcoGeneiEG13634. essD.

Phylogenomic databases

eggNOGiENOG4105QFS. Bacteria.
ENOG4111XDG. LUCA.
HOGENOMiHOG000120019.
OMAiVMKSMDK.

Enzyme and pathway databases

BioCyciEcoCyc:G6309-MONOMER.
ECOL316407:JW0543-MONOMER.

Miscellaneous databases

PROiP0A9R2.

Family and domain databases

InterProiIPR007054. Lysis_S.
[Graphical view]
PfamiPF04971. Phage_holin_2_1. 1 hit.
[Graphical view]
PIRSFiPIRSF030786. Lysis_S. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiESSD_ECOLI
AccessioniPrimary (citable) accession number: P0A9R2
Secondary accession number(s): P77242, Q2MBM7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 2, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.