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Protein

Cold shock-like protein CspI

Gene

cspI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6825-MONOMER.
ECOL316407:JW1544-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspI
Short name:
CPS-I
Gene namesi
Name:cspI
Synonyms:cspJ
Ordered Locus Names:b1552, JW1544
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13877. cspI.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001002721 – 70Cold shock-like protein CspIAdd BLAST70

Proteomic databases

PaxDbiP0A986.
PRIDEiP0A986.

Interactioni

Protein-protein interaction databases

BioGridi4260240. 238 interactors.
DIPiDIP-48195N.
IntActiP0A986. 17 interactors.
MINTiMINT-1309031.
STRINGi511145.b1552.

Structurei

3D structure databases

ProteinModelPortaliP0A986.
SMRiP0A986.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 67CSDAdd BLAST61

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.Curated

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A986.
KOiK03704.
OMAiEVKNGPK.
PhylomeDBiP0A986.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A986-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNKMTGLVK WFNPEKGFGF ITPKDGSKDV FVHFSAIQSN DFKTLTENQE
60 70
VEFGIENGPK GPAAVHVVAL
Length:70
Mass (Da):7,684
Last modified:July 19, 2005 - v1
Checksum:i0189D405C17A4210
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74625.1.
AP009048 Genomic DNA. Translation: BAA15254.1.
PIRiC64910.
RefSeqiNP_416070.1. NC_000913.3.
WP_000066495.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74625; AAC74625; b1552.
BAA15254; BAA15254; BAA15254.
GeneIDi946099.
KEGGiecj:JW1544.
eco:b1552.
PATRICi32118406. VBIEscCol129921_1623.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74625.1.
AP009048 Genomic DNA. Translation: BAA15254.1.
PIRiC64910.
RefSeqiNP_416070.1. NC_000913.3.
WP_000066495.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A986.
SMRiP0A986.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260240. 238 interactors.
DIPiDIP-48195N.
IntActiP0A986. 17 interactors.
MINTiMINT-1309031.
STRINGi511145.b1552.

Proteomic databases

PaxDbiP0A986.
PRIDEiP0A986.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74625; AAC74625; b1552.
BAA15254; BAA15254; BAA15254.
GeneIDi946099.
KEGGiecj:JW1544.
eco:b1552.
PATRICi32118406. VBIEscCol129921_1623.

Organism-specific databases

EchoBASEiEB3636.
EcoGeneiEG13877. cspI.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A986.
KOiK03704.
OMAiEVKNGPK.
PhylomeDBiP0A986.

Enzyme and pathway databases

BioCyciEcoCyc:G6825-MONOMER.
ECOL316407:JW1544-MONOMER.

Miscellaneous databases

PROiP0A986.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCSPI_ECOLI
AccessioniPrimary (citable) accession number: P0A986
Secondary accession number(s): P77605
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 2, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.