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Protein

Cold shock-like protein CspG

Gene

cspG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Stress response, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6511-MONOMER.
ECOL316407:JW0974-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspG
Short name:
CPS-G
Gene namesi
Name:cspG
Synonyms:cspI
Ordered Locus Names:b0990, JW0974
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14243. cspG.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001002621 – 70Cold shock-like protein CspGAdd BLAST70

Proteomic databases

PaxDbiP0A978.
PRIDEiP0A978.

Expressioni

Inductioni

In response to low temperature.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rplAP0A7L02EBI-547581,EBI-543771

Protein-protein interaction databases

BioGridi4260917. 8 interactors.
DIPiDIP-47938N.
IntActiP0A978. 23 interactors.
MINTiMINT-1247768.
STRINGi511145.b0990.

Structurei

3D structure databases

ProteinModelPortaliP0A978.
SMRiP0A978.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 67CSDAdd BLAST61

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.Curated

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A978.
KOiK03704.
OMAiNDKVEFT.
PhylomeDBiP0A978.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A978-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNKMTGLVK WFNADKGFGF ITPDDGSKDV FVHFTAIQSN EFRTLNENQK
60 70
VEFSIEQGQR GPAAANVVTL
Length:70
Mass (Da):7,781
Last modified:July 19, 2005 - v1
Checksum:i3B9910355A105D3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63344 mRNA. Translation: BAA09669.1.
AF003591 Genomic DNA. Translation: AAB61741.1.
U00096 Genomic DNA. Translation: AAC74075.1.
AP009048 Genomic DNA. Translation: BAA35756.1.
PIRiD64840.
RefSeqiNP_415510.1. NC_000913.3.
WP_000066490.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74075; AAC74075; b0990.
BAA35756; BAA35756; BAA35756.
GeneIDi945591.
KEGGiecj:JW0974.
eco:b0990.
PATRICi32117205. VBIEscCol129921_1026.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63344 mRNA. Translation: BAA09669.1.
AF003591 Genomic DNA. Translation: AAB61741.1.
U00096 Genomic DNA. Translation: AAC74075.1.
AP009048 Genomic DNA. Translation: BAA35756.1.
PIRiD64840.
RefSeqiNP_415510.1. NC_000913.3.
WP_000066490.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A978.
SMRiP0A978.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260917. 8 interactors.
DIPiDIP-47938N.
IntActiP0A978. 23 interactors.
MINTiMINT-1247768.
STRINGi511145.b0990.

Proteomic databases

PaxDbiP0A978.
PRIDEiP0A978.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74075; AAC74075; b0990.
BAA35756; BAA35756; BAA35756.
GeneIDi945591.
KEGGiecj:JW0974.
eco:b0990.
PATRICi32117205. VBIEscCol129921_1026.

Organism-specific databases

EchoBASEiEB3993.
EcoGeneiEG14243. cspG.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A978.
KOiK03704.
OMAiNDKVEFT.
PhylomeDBiP0A978.

Enzyme and pathway databases

BioCyciEcoCyc:G6511-MONOMER.
ECOL316407:JW0974-MONOMER.

Miscellaneous databases

PROiP0A978.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCSPG_ECOLI
AccessioniPrimary (citable) accession number: P0A978
Secondary accession number(s): Q47130
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 2, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.