Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Cold shock-like protein CspG

Gene

cspG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Stress response, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6511-MONOMER.
ECOL316407:JW0974-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspG
Short name:
CPS-G
Gene namesi
Name:cspG
Synonyms:cspI
Ordered Locus Names:b0990, JW0974
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14243. cspG.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7070Cold shock-like protein CspGPRO_0000100262Add
BLAST

Proteomic databases

EPDiP0A978.
PaxDbiP0A978.
PRIDEiP0A978.

Expressioni

Inductioni

In response to low temperature.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rplAP0A7L02EBI-547581,EBI-543771

Protein-protein interaction databases

BioGridi4260917. 8 interactions.
DIPiDIP-47938N.
IntActiP0A978. 23 interactions.
MINTiMINT-1247768.
STRINGi511145.b0990.

Structurei

3D structure databases

ProteinModelPortaliP0A978.
SMRiP0A978. Positions 2-70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 6761CSDAdd
BLAST

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.Curated

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A978.
KOiK03704.
OMAiNDKVEFT.
OrthoDBiEOG618R0J.
PhylomeDBiP0A978.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A978-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNKMTGLVK WFNADKGFGF ITPDDGSKDV FVHFTAIQSN EFRTLNENQK
60 70
VEFSIEQGQR GPAAANVVTL
Length:70
Mass (Da):7,781
Last modified:July 19, 2005 - v1
Checksum:i3B9910355A105D3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63344 mRNA. Translation: BAA09669.1.
AF003591 Genomic DNA. Translation: AAB61741.1.
U00096 Genomic DNA. Translation: AAC74075.1.
AP009048 Genomic DNA. Translation: BAA35756.1.
PIRiD64840.
RefSeqiNP_415510.1. NC_000913.3.
WP_000066490.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74075; AAC74075; b0990.
BAA35756; BAA35756; BAA35756.
GeneIDi945591.
KEGGiecj:JW0974.
eco:b0990.
PATRICi32117205. VBIEscCol129921_1026.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63344 mRNA. Translation: BAA09669.1.
AF003591 Genomic DNA. Translation: AAB61741.1.
U00096 Genomic DNA. Translation: AAC74075.1.
AP009048 Genomic DNA. Translation: BAA35756.1.
PIRiD64840.
RefSeqiNP_415510.1. NC_000913.3.
WP_000066490.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A978.
SMRiP0A978. Positions 2-70.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260917. 8 interactions.
DIPiDIP-47938N.
IntActiP0A978. 23 interactions.
MINTiMINT-1247768.
STRINGi511145.b0990.

Proteomic databases

EPDiP0A978.
PaxDbiP0A978.
PRIDEiP0A978.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74075; AAC74075; b0990.
BAA35756; BAA35756; BAA35756.
GeneIDi945591.
KEGGiecj:JW0974.
eco:b0990.
PATRICi32117205. VBIEscCol129921_1026.

Organism-specific databases

EchoBASEiEB3993.
EcoGeneiEG14243. cspG.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
InParanoidiP0A978.
KOiK03704.
OMAiNDKVEFT.
OrthoDBiEOG618R0J.
PhylomeDBiP0A978.

Enzyme and pathway databases

BioCyciEcoCyc:G6511-MONOMER.
ECOL316407:JW0974-MONOMER.

Miscellaneous databases

PROiP0A978.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A novel member of the cspA family of genes that is induced by cold shock in Escherichia coli."
    Nakashima K., Kanamaru K., Mizuno T., Horikoshi K.
    J. Bacteriol. 178:2994-2997(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Detection and speciation of bacteria through PCR using universal major cold-shock protein primer oligomers."
    Francis K.P., Stewart G.S.A.B.
    J. Ind. Microbiol. Biotechnol. 19:286-293(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  5. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiCSPG_ECOLI
AccessioniPrimary (citable) accession number: P0A978
Secondary accession number(s): Q47130
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: March 16, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.