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Protein

Cold shock-like protein CspE

Gene

cspE

Organism
Escherichia coli O157:H7
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspE
Short name:
CSP-E
Gene namesi
Name:cspE
Ordered Locus Names:Z0769, ECs0662
OrganismiEscherichia coli O157:H7
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000558 Componenti: Chromosome
  • UP000002519 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001002542 – 69Cold shock-like protein CspEAdd BLAST68

Proteomic databases

PRIDEiP0A974

Interactioni

Protein-protein interaction databases

STRINGi155864.Z0769

Structurei

3D structure databases

ProteinModelPortaliP0A974
SMRiP0A974
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66CSDAdd BLAST61

Phylogenomic databases

eggNOGiENOG4105VEQ Bacteria
COG1278 LUCA
HOGENOMiHOG000070674
KOiK03704
OMAiPRAKNVR

Family and domain databases

CDDicd04458 CSP_CDS, 1 hit
InterProiView protein in InterPro
IPR019844 Cold-shock_CS
IPR012156 Cold_shock_CspA
IPR011129 CSD
IPR002059 CSP_DNA-bd
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF00313 CSD, 1 hit
PIRSFiPIRSF002599 Cold_shock_A, 1 hit
PRINTSiPR00050 COLDSHOCK
SMARTiView protein in SMART
SM00357 CSP, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00352 CSD_1, 1 hit
PS51857 CSD_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A974-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKIKGNVKW FNESKGFGFI TPEDGSKDVF VHFSAIQTNG FKTLAEGQRV
60
EFEITNGAKG PSAANVIAL
Length:69
Mass (Da):7,463
Last modified:January 23, 2007 - v2
Checksum:i1C33C920AA82405C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA Translation: AAG54958.1
BA000007 Genomic DNA Translation: BAB34085.1
PIRiB85562
F90711
RefSeqiNP_308689.1, NC_002695.1
WP_000034825.1, NZ_NOKN01000002.1

Genome annotation databases

EnsemblBacteriaiAAG54958; AAG54958; Z0769
BAB34085; BAB34085; BAB34085
GeneIDi917022
KEGGiece:Z0769
ecs:ECs0662
PATRICifig|386585.9.peg.773

Similar proteinsi

Entry informationi

Entry nameiCSPE_ECO57
AccessioniPrimary (citable) accession number: P0A974
Secondary accession number(s): P36997, P77103, P80434
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: January 23, 2007
Last modified: April 25, 2018
This is version 82 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health