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Protein

Cold shock-like protein CspE

Gene

cspE

Organism
Escherichia coli O157:H7
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciECOO157:CSPE-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspE
Short name:
CSP-E
Gene namesi
Name:cspE
Ordered Locus Names:Z0769, ECs0662
OrganismiEscherichia coli O157:H7
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000558 Componenti: Chromosome
  • UP000002519 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001002542 – 69Cold shock-like protein CspEAdd BLAST68

Proteomic databases

PRIDEiP0A974.

Interactioni

Protein-protein interaction databases

MINTiMINT-1221407.
STRINGi155864.Z0769.

Structurei

3D structure databases

ProteinModelPortaliP0A974.
SMRiP0A974.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66CSDAdd BLAST61

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.Curated

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
KOiK03704.
OMAiHSEIQES.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A974-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKIKGNVKW FNESKGFGFI TPEDGSKDVF VHFSAIQTNG FKTLAEGQRV
60
EFEITNGAKG PSAANVIAL
Length:69
Mass (Da):7,463
Last modified:January 23, 2007 - v2
Checksum:i1C33C920AA82405C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG54958.1.
BA000007 Genomic DNA. Translation: BAB34085.1.
PIRiB85562.
F90711.
RefSeqiNP_308689.1. NC_002695.1.
WP_000034825.1. NZ_LPWC02000002.1.

Genome annotation databases

EnsemblBacteriaiAAG54958; AAG54958; Z0769.
BAB34085; BAB34085; BAB34085.
GeneIDi23337261.
917022.
KEGGiece:Z0769.
ecs:ECs0662.
PATRICi18350312. VBIEscCol44059_0675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG54958.1.
BA000007 Genomic DNA. Translation: BAB34085.1.
PIRiB85562.
F90711.
RefSeqiNP_308689.1. NC_002695.1.
WP_000034825.1. NZ_LPWC02000002.1.

3D structure databases

ProteinModelPortaliP0A974.
SMRiP0A974.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-1221407.
STRINGi155864.Z0769.

Proteomic databases

PRIDEiP0A974.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG54958; AAG54958; Z0769.
BAB34085; BAB34085; BAB34085.
GeneIDi23337261.
917022.
KEGGiece:Z0769.
ecs:ECs0662.
PATRICi18350312. VBIEscCol44059_0675.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070674.
KOiK03704.
OMAiHSEIQES.

Enzyme and pathway databases

BioCyciECOO157:CSPE-MONOMER.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCSPE_ECO57
AccessioniPrimary (citable) accession number: P0A974
Secondary accession number(s): P36997, P77103, P80434
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.