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Protein

Outer membrane lipoprotein SlyB

Gene

slyB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6881-MONOMER.
ECOL316407:JW1633-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Outer membrane lipoprotein SlyB
Gene namesi
Name:slyB
Ordered Locus Names:b1641, JW1633
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13409. slyB.

Subcellular locationi

  • Cell outer membrane Curated; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

  • cell outer membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17PROSITE-ProRule annotationAdd BLAST17
ChainiPRO_000001816118 – 155Outer membrane lipoprotein SlyBAdd BLAST138

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi18N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi18S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

EPDiP0A905.
PaxDbiP0A905.
PRIDEiP0A905.

Expressioni

Inductioni

Induced by low extracellular levels of magnesium via the PhoQ/PhoP two-component regulatory system.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4263490. 212 interactors.
IntActiP0A905. 4 interactors.
STRINGi511145.b1641.

Structurei

3D structure databases

ProteinModelPortaliP0A905.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Pcp/SlyB lipoprotein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108XTF. Bacteria.
COG3133. LUCA.
HOGENOMiHOG000220583.
InParanoidiP0A905.
KOiK06077.
OMAiGCAYNSS.

Family and domain databases

InterProiIPR008816. Gly_zipper_2TM_dom.
[Graphical view]
PfamiPF05433. Rick_17kDa_Anti. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A905-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKRVLVVSM VGLSLVGCVN NDTLSGDVYT ASEAKQVQNV SYGTIVNVRP
60 70 80 90 100
VQIQGGDDSN VIGAIGGAVL GGFLGNTVGG GTGRSLATAA GAVAGGVAGQ
110 120 130 140 150
GVQSAMNKTQ GVELEIRKDD GNTIMVVQKQ GNTRFSPGQR VVLASNGSQV

TVSPR
Length:155
Mass (Da):15,602
Last modified:July 19, 2005 - v1
Checksum:i543EB8A4069A5FA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAT48133.1.
AP009048 Genomic DNA. Translation: BAA15402.1.
PIRiC64921.
RefSeqiWP_000597196.1. NZ_LN832404.1.
YP_025304.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAT48133; AAT48133; b1641.
BAA15402; BAA15402; BAA15402.
GeneIDi946801.
KEGGiecj:JW1633.
eco:b1641.
PATRICi32118584. VBIEscCol129921_1712.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAT48133.1.
AP009048 Genomic DNA. Translation: BAA15402.1.
PIRiC64921.
RefSeqiWP_000597196.1. NZ_LN832404.1.
YP_025304.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP0A905.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263490. 212 interactors.
IntActiP0A905. 4 interactors.
STRINGi511145.b1641.

Proteomic databases

EPDiP0A905.
PaxDbiP0A905.
PRIDEiP0A905.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT48133; AAT48133; b1641.
BAA15402; BAA15402; BAA15402.
GeneIDi946801.
KEGGiecj:JW1633.
eco:b1641.
PATRICi32118584. VBIEscCol129921_1712.

Organism-specific databases

EchoBASEiEB3185.
EcoGeneiEG13409. slyB.

Phylogenomic databases

eggNOGiENOG4108XTF. Bacteria.
COG3133. LUCA.
HOGENOMiHOG000220583.
InParanoidiP0A905.
KOiK06077.
OMAiGCAYNSS.

Enzyme and pathway databases

BioCyciEcoCyc:G6881-MONOMER.
ECOL316407:JW1633-MONOMER.

Miscellaneous databases

PROiP0A905.

Family and domain databases

InterProiIPR008816. Gly_zipper_2TM_dom.
[Graphical view]
PfamiPF05433. Rick_17kDa_Anti. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSLYB_ECOLI
AccessioniPrimary (citable) accession number: P0A905
Secondary accession number(s): P55741, P76183
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: November 30, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.