ID   YBDB_ECOLI              Reviewed;         137 AA.
AC   P0A8Y8; P15050; Q2MBK4;
DT   21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   21-JUN-2005, sequence version 1.
DT   16-JUN-2009, entry version 33.
DE   RecName: Full=Esterase ybdB;
DE            EC=3.1.-.-;
DE   AltName: Full=p15;
GN   Name=ybdB; OrderedLocusNames=b0597, JW0589;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   MEDLINE=89123154; PubMed=2521621;
RA   Nahlik M.S., Brickman T.J., Ozenberger B.A., McIntosh M.A.;
RT   "Nucleotide sequence and transcriptional organization of the
RT   Escherichia coli enterobactin biosynthesis cistrons entB and entA.";
RL   J. Bacteriol. 171:784-790(1989).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   MEDLINE=89123155; PubMed=2521622;
RA   Liu J., Duncan K., Walsh C.T.;
RT   "Nucleotide sequence of a cluster of Escherichia coli enterobactin
RT   biosynthesis genes: identification of entA and purification of its
RT   product 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.";
RL   J. Bacteriol. 171:791-798(1989).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RA   Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA   Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA   Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT   "Sequence of minutes 4-25 of Escherichia coli.";
RL   Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   MEDLINE=97426617; PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
RA   Mau B., Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1474(1997).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains
RT   MG1655 and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [6]
RP   FUNCTION.
RX   PubMed=15808744; DOI=10.1016/j.femsre.2004.12.006;
RA   Kuznetsova E., Proudfoot M., Sanders S.A., Reinking J., Savchenko A.,
RA   Arrowsmith C.H., Edwards A.M., Yakunin A.F.;
RT   "Enzyme genomics: application of general enzymatic screens to discover
RT   new enzymes.";
RL   FEMS Microbiol. Rev. 29:263-279(2005).
RN   [7]
RP   X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF 2-137.
RA   Murshudov G.N., Vagin A.A., Dodson E.J.;
RT   "Crystal structure of a putative thioesterase.";
RL   Submitted (DEC-2003) to the PDB data bank.
CC   -!- FUNCTION: Displays esterase activity toward palmitoyl-CoA and pNP-
CC       butyrate.
CC   -!- INTERACTION:
CC       P18843:nadE; NbExp=1; IntAct=EBI-1118982, EBI-548960;
CC   -!- SIMILARITY: Belongs to the UPF0152 (paaI) family.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; M24148; AAA16104.1; -; Unassigned_DNA.
DR   EMBL; M24143; AAA76837.1; -; Genomic_DNA.
DR   EMBL; U82598; AAB40797.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC73698.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE76352.1; -; Genomic_DNA.
DR   PIR; B91904; Q3ECEA.
DR   RefSeq; AP_001244.1; -.
DR   RefSeq; NP_415129.1; -.
DR   PDB; 1VH9; X-ray; 2.15 A; A/B=2-137.
DR   PDBsum; 1VH9; -.
DR   IntAct; P0A8Y8; 1.
DR   GeneID; 945215; -.
DR   GenomeReviews; AP009048_GR; JW0589.
DR   GenomeReviews; U00096_GR; b0597.
DR   KEGG; ecj:JW0589; -.
DR   KEGG; eco:b0597; -.
DR   EchoBASE; EB1097; -.
DR   EcoGene; EG11105; ybdB.
DR   HOGENOM; P0A8Y8; -.
DR   OMA; P0A8Y8; TTHEIVM.
DR   BioCyc; EcoCyc:EG11105-MON; -.
DR   BRENDA; 3.1.2.2; 246.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0005515; F:protein binding; IPI:IntAct.
DR   InterPro; IPR003736; PAAI.
DR   InterPro; IPR006683; Thioestr_supf.
DR   Pfam; PF03061; 4HBT; 1.
DR   TIGRFAMs; TIGR00369; unchar_dom_1; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Complete proteome; Hydrolase.
FT   CHAIN         1    137       Esterase ybdB.
FT                                /FTId=PRO_0000156676.
FT   HELIX         9     14
FT   HELIX        20     23
FT   STRAND       27     31
FT   STRAND       36     41
FT   TURN         44     46
FT   STRAND       51     53
FT   HELIX        55     71
FT   STRAND       80     89
FT   STRAND       95    107
FT   STRAND      109    119
FT   STRAND      125    135
SQ   SEQUENCE   137 AA;  14970 MW;  C8DF8DE63815F206 CRC64;
     MIWKRHLTLD ELNATSDNTM VAHLGIVYTR LGDDVLEAEM PVDTRTHQPF GLLHGGASAA
     LAETLGSMAG FMMTRDGQCV VGTELNATHH RPVSEGKVRG VCQPLHLGRQ NQSWEIVVFD
     EQGRRCCTCR LGTAVLG
//