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Protein

UPF0319 protein YccT

Gene

yccT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6498-MONOMER.
ECOL316407:JW0947-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0319 protein YccT
Gene namesi
Name:yccT
Ordered Locus Names:b0964, JW0947
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13722. yccT.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 220200UPF0319 protein YccTPRO_0000036294Add
BLAST

Proteomic databases

PaxDbiP0A8X4.
PRIDEiP0A8X4.

Interactioni

Protein-protein interaction databases

IntActiP0A8X4. 5 interactions.
STRINGi511145.b0964.

Structurei

3D structure databases

ProteinModelPortaliP0A8X4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0319 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108Q67. Bacteria.
COG3110. LUCA.
HOGENOMiHOG000219325.
KOiK09909.
OMAiYQQADKE.
OrthoDBiEOG69D3D4.

Family and domain databases

HAMAPiMF_00789. UPF0319.
InterProiIPR018635. UPF0319.
[Graphical view]
PfamiPF09829. DUF2057. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A8X4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTGIVTTLI ALCLPVSVFA TTLRLSTDVD LLVLDGKKVS SSLLRGADSI
60 70 80 90 100
ELDNGPHQLV FRVEKTIHLS NSEERLYISP PLVVSFNTQL INQVNFRLPR
110 120 130 140 150
LENEREANHF DAAPRLELLD GDATPIPVKL DILAITSTAK TIDYEVEVER
160 170 180 190 200
YNKSAKRASL PQFATMMADD STLLSGVSEL DAIPPQSQVL TEQRLKYWFK
210 220
LADPQTRNTF LQWAEKQPSS
Length:220
Mass (Da):24,594
Last modified:June 7, 2005 - v1
Checksum:i591A3FA67E0941CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74050.1.
AP009048 Genomic DNA. Translation: BAA35729.1.
PIRiC64837.
RefSeqiNP_415484.1. NC_000913.3.
WP_000847791.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74050; AAC74050; b0964.
BAA35729; BAA35729; BAA35729.
GeneIDi945577.
KEGGiecj:JW0947.
eco:b0964.
PATRICi32117147. VBIEscCol129921_0998.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74050.1.
AP009048 Genomic DNA. Translation: BAA35729.1.
PIRiC64837.
RefSeqiNP_415484.1. NC_000913.3.
WP_000847791.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A8X4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP0A8X4. 5 interactions.
STRINGi511145.b0964.

Proteomic databases

PaxDbiP0A8X4.
PRIDEiP0A8X4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74050; AAC74050; b0964.
BAA35729; BAA35729; BAA35729.
GeneIDi945577.
KEGGiecj:JW0947.
eco:b0964.
PATRICi32117147. VBIEscCol129921_0998.

Organism-specific databases

EchoBASEiEB3486.
EcoGeneiEG13722. yccT.

Phylogenomic databases

eggNOGiENOG4108Q67. Bacteria.
COG3110. LUCA.
HOGENOMiHOG000219325.
KOiK09909.
OMAiYQQADKE.
OrthoDBiEOG69D3D4.

Enzyme and pathway databases

BioCyciEcoCyc:G6498-MONOMER.
ECOL316407:JW0947-MONOMER.

Miscellaneous databases

PROiP0A8X4.

Family and domain databases

HAMAPiMF_00789. UPF0319.
InterProiIPR018635. UPF0319.
[Graphical view]
PfamiPF09829. DUF2057. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYCCT_ECOLI
AccessioniPrimary (citable) accession number: P0A8X4
Secondary accession number(s): P75873
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: July 6, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.