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Protein

UPF0294 protein YafD

Gene

yafD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11650-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0294 protein YafD
Gene namesi
Name:yafD
Ordered Locus Names:b0209, JW5017
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11650 yafD

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000746371 – 266UPF0294 protein YafDAdd BLAST266

Proteomic databases

PaxDbiP0A8U2
PRIDEiP0A8U2

Interactioni

Protein-protein interaction databases

BioGridi4261255, 229 interactors
DIPiDIP-47877N
STRINGi316385.ECDH10B_0190

Structurei

3D structure databases

ProteinModelPortaliP0A8U2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0294 family.Curated

Phylogenomic databases

eggNOGiENOG4107NA1 Bacteria
COG3021 LUCA
HOGENOMiHOG000275410
InParanoidiP0A8U2
OMAiCCPLREK
PhylomeDBiP0A8U2

Family and domain databases

Gene3Di3.60.10.10, 1 hit
HAMAPiMF_01119 UPF0294, 1 hit
InterProiView protein in InterPro
IPR036691 Endo/exonu/phosph_ase_sf
IPR005135 Endo/exonuclease/phosphatase
IPR022958 UPF0294
PfamiView protein in Pfam
PF03372 Exo_endo_phos, 1 hit
SUPFAMiSSF56219 SSF56219, 1 hit

Sequencei

Sequence statusi: Complete.

P0A8U2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKNTYAMRY VAGQPAERIL PPGSFASIGQ ALPPGEPLST EERIRILVWN
60 70 80 90 100
IYKQQRAEWL SVLKNYGKDA HLVLLQEAQT TPELVQFATA NYLAADQVPA
110 120 130 140 150
FVLPQHPSGV MTLSAAHPVY CCPLREREPI LRLAKSALVT VYPLPDTRLL
160 170 180 190 200
MVVNIHAVNF SLGVDVYSKQ LLPIGDQIAH HSGPVIMAGD FNAWSRRRMN
210 220 230 240 250
ALYRFAREMS LRQVRFTDDQ RRRAFGRPLD FVFYRGLNVS EASVLVTRAS
260
DHNPLLVEFS PGKPDK
Length:266
Mass (Da):29,992
Last modified:June 7, 2005 - v1
Checksum:i5F5AD2B0C4CE5794
GO

Sequence cautioni

The sequence AAB08631 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAA02172 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti112T → S (PubMed:1663890).Curated1
Sequence conflicti223R → G (PubMed:1663890).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D12650 Genomic DNA Translation: BAA02172.1 Different initiation.
U70214 Genomic DNA Translation: AAB08631.1 Different initiation.
U00096 Genomic DNA Translation: AAC73314.1
AP009048 Genomic DNA Translation: BAA77880.2
X60739 Genomic DNA No translation available.
PIRiC64745
RefSeqiNP_414745.1, NC_000913.3
WP_001230983.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73314; AAC73314; b0209
BAA77880; BAA77880; BAA77880
GeneIDi946286
KEGGiecj:JW5017
eco:b0209
PATRICifig|511145.12.peg.211

Similar proteinsi

Entry informationi

Entry nameiYAFD_ECOLI
AccessioniPrimary (citable) accession number: P0A8U2
Secondary accession number(s): P30865, P75671
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: March 28, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health