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Protein

UPF0246 protein YaaA

Gene

yaaA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • response to hydroperoxide Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG10011-MONOMER.
ECOL316407:JW0005-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0246 protein YaaA
Gene namesi
Name:yaaA
Ordered Locus Names:b0006, JW0005
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10011. yaaA.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258UPF0246 protein YaaAPRO_0000203983Add
BLAST

Proteomic databases

PaxDbiP0A8I3.
PRIDEiP0A8I3.

Interactioni

Protein-protein interaction databases

BioGridi4261937. 5 interactions.
DIPiDIP-35783N.
IntActiP0A8I3. 5 interactions.
MINTiMINT-1310738.
STRINGi511145.b0006.

Structurei

Secondary structure

1
258
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi2 – 54Combined sources
Beta strandi9 – 113Combined sources
Beta strandi13 – 153Combined sources
Helixi28 – 3811Combined sources
Helixi43 – 508Combined sources
Helixi54 – 6613Combined sources
Turni73 – 753Combined sources
Helixi79 – 824Combined sources
Beta strandi83 – 853Combined sources
Helixi86 – 916Combined sources
Helixi93 – 953Combined sources
Helixi98 – 10710Combined sources
Beta strandi108 – 1125Combined sources
Turni113 – 1153Combined sources
Beta strandi116 – 1183Combined sources
Beta strandi122 – 1243Combined sources
Beta strandi140 – 1423Combined sources
Helixi143 – 1475Combined sources
Helixi150 – 1578Combined sources
Beta strandi161 – 1633Combined sources
Beta strandi166 – 1716Combined sources
Helixi173 – 1764Combined sources
Helixi181 – 1833Combined sources
Beta strandi185 – 19713Combined sources
Beta strandi200 – 2023Combined sources
Helixi205 – 22117Combined sources
Helixi227 – 2326Combined sources
Helixi235 – 2373Combined sources
Beta strandi249 – 2546Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
5CAJX-ray1.65A/B2-258[»]
ProteinModelPortaliP0A8I3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0246 family.Curated

Phylogenomic databases

eggNOGiENOG4105D1Q. Bacteria.
COG3022. LUCA.
HOGENOMiHOG000218488.
InParanoidiP0A8I3.
KOiK09861.
OMAiKARGMMS.
PhylomeDBiP0A8I3.

Family and domain databases

HAMAPiMF_00652. UPF0246. 1 hit.
InterProiIPR005583. YaaA.
[Graphical view]
PfamiPF03883. DUF328. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A8I3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLILISPAKT LDYQSPLTTT RYTLPELLDN SQQLIHEARK LTPPQISTLM
60 70 80 90 100
RISDKLAGIN AARFHDWQPD FTPANARQAI LAFKGDVYTG LQAETFSEDD
110 120 130 140 150
FDFAQQHLRM LSGLYGVLRP LDLMQPYRLE MGIRLENARG KDLYQFWGDI
160 170 180 190 200
ITNKLNEALA AQGDNVVINL ASDEYFKSVK PKKLNAEIIK PVFLDEKNGK
210 220 230 240 250
FKIISFYAKK ARGLMSRFII ENRLTKPEQL TGFNSEGYFF DEDSSSNGEL

VFKRYEQR
Length:258
Mass (Da):29,586
Last modified:June 7, 2005 - v1
Checksum:i050257199733C8F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73117.1.
AP009048 Genomic DNA. Translation: BAB96584.1.
U14003 Genomic DNA. Translation: AAA97304.1.
PIRiS40534. Q3ECTC.
RefSeqiNP_414547.1. NC_000913.3.
WP_000906197.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73117; AAC73117; b0006.
BAB96584; BAB96584; BAB96584.
GeneIDi944749.
KEGGiecj:JW0005.
eco:b0006.
PATRICi32115107. VBIEscCol129921_0005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73117.1.
AP009048 Genomic DNA. Translation: BAB96584.1.
U14003 Genomic DNA. Translation: AAA97304.1.
PIRiS40534. Q3ECTC.
RefSeqiNP_414547.1. NC_000913.3.
WP_000906197.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
5CAJX-ray1.65A/B2-258[»]
ProteinModelPortaliP0A8I3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261937. 5 interactions.
DIPiDIP-35783N.
IntActiP0A8I3. 5 interactions.
MINTiMINT-1310738.
STRINGi511145.b0006.

Proteomic databases

PaxDbiP0A8I3.
PRIDEiP0A8I3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73117; AAC73117; b0006.
BAB96584; BAB96584; BAB96584.
GeneIDi944749.
KEGGiecj:JW0005.
eco:b0006.
PATRICi32115107. VBIEscCol129921_0005.

Organism-specific databases

EchoBASEiEB0011.
EcoGeneiEG10011. yaaA.

Phylogenomic databases

eggNOGiENOG4105D1Q. Bacteria.
COG3022. LUCA.
HOGENOMiHOG000218488.
InParanoidiP0A8I3.
KOiK09861.
OMAiKARGMMS.
PhylomeDBiP0A8I3.

Enzyme and pathway databases

BioCyciEcoCyc:EG10011-MONOMER.
ECOL316407:JW0005-MONOMER.

Miscellaneous databases

PROiP0A8I3.

Family and domain databases

HAMAPiMF_00652. UPF0246. 1 hit.
InterProiIPR005583. YaaA.
[Graphical view]
PfamiPF03883. DUF328. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYAAA_ECOLI
AccessioniPrimary (citable) accession number: P0A8I3
Secondary accession number(s): P11288
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.