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Protein

UPF0234 protein YajQ

Gene

yajQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Binds nucleotides, may bind tRNA.

GO - Molecular functioni

  • ATP binding Source: EcoliWiki
  • GTP binding Source: EcoCyc
  • tRNA binding Source: EcoliWiki

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoCyc
Complete GO annotation...

Keywords - Ligandi

Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6240-MONOMER.
ECOL316407:JW5058-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0234 protein YajQ
Gene namesi
Name:yajQ
Ordered Locus Names:b0426, JW5058
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13613. yajQ.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 163163UPF0234 protein YajQPRO_0000106180Add
BLAST

Proteomic databases

EPDiP0A8E7.
PaxDbiP0A8E7.
PRIDEiP0A8E7.

Interactioni

Subunit structurei

Monomer.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
napDP0A9I52EBI-370752,EBI-554985

Protein-protein interaction databases

BioGridi4259513. 7 interactions.
DIPiDIP-31840N.
IntActiP0A8E7. 5 interactions.
MINTiMINT-1226917.
STRINGi511145.b0426.

Structurei

3D structure databases

ProteinModelPortaliP0A8E7.
SMRiP0A8E7. Positions 2-163.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0234 family.Curated

Phylogenomic databases

eggNOGiENOG4108VPT. Bacteria.
COG1666. LUCA.
HOGENOMiHOG000249184.
InParanoidiP0A8E7.
KOiK09767.
OMAiSDFDRQE.
OrthoDBiEOG6FZ4J6.
PhylomeDBiP0A8E7.

Family and domain databases

HAMAPiMF_00632. UPF0234.
InterProiIPR007551. DUF520.
[Graphical view]
PfamiPF04461. DUF520. 1 hit.
[Graphical view]
SUPFAMiSSF89963. SSF89963. 2 hits.

Sequencei

Sequence statusi: Complete.

P0A8E7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSFDIVSEV DLQEARNAVD NASREVESRF DFRNVEASFE LNDASKTIKV
60 70 80 90 100
LSESDFQVNQ LLDILRAKLL KRGIEGSSLD VPENIVHSGK TWFVEAKLKQ
110 120 130 140 150
GIESATQKKI VKMIKDSKLK VQAQIQGDEI RVTGKSRDDL QAVMAMVRGG
160
DLGQPFQFKN FRD
Length:163
Mass (Da):18,344
Last modified:January 15, 2008 - v2
Checksum:iDCBD1D4EB1630111
GO

Sequence cautioni

The sequence AAB40182.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40182.1. Different initiation.
U00096 Genomic DNA. Translation: AAC73529.2.
AP009048 Genomic DNA. Translation: BAE76206.1.
PIRiB64772.
RefSeqiNP_414960.2. NC_000913.3.
WP_001138904.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73529; AAC73529; b0426.
BAE76206; BAE76206; BAE76206.
GeneIDi945063.
KEGGiecj:JW5058.
eco:b0426.
PATRICi32116003. VBIEscCol129921_0443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40182.1. Different initiation.
U00096 Genomic DNA. Translation: AAC73529.2.
AP009048 Genomic DNA. Translation: BAE76206.1.
PIRiB64772.
RefSeqiNP_414960.2. NC_000913.3.
WP_001138904.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A8E7.
SMRiP0A8E7. Positions 2-163.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259513. 7 interactions.
DIPiDIP-31840N.
IntActiP0A8E7. 5 interactions.
MINTiMINT-1226917.
STRINGi511145.b0426.

Proteomic databases

EPDiP0A8E7.
PaxDbiP0A8E7.
PRIDEiP0A8E7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73529; AAC73529; b0426.
BAE76206; BAE76206; BAE76206.
GeneIDi945063.
KEGGiecj:JW5058.
eco:b0426.
PATRICi32116003. VBIEscCol129921_0443.

Organism-specific databases

EchoBASEiEB3379.
EcoGeneiEG13613. yajQ.

Phylogenomic databases

eggNOGiENOG4108VPT. Bacteria.
COG1666. LUCA.
HOGENOMiHOG000249184.
InParanoidiP0A8E7.
KOiK09767.
OMAiSDFDRQE.
OrthoDBiEOG6FZ4J6.
PhylomeDBiP0A8E7.

Enzyme and pathway databases

BioCyciEcoCyc:G6240-MONOMER.
ECOL316407:JW5058-MONOMER.

Miscellaneous databases

PROiP0A8E7.

Family and domain databases

HAMAPiMF_00632. UPF0234.
InterProiIPR007551. DUF520.
[Graphical view]
PfamiPF04461. DUF520. 1 hit.
[Graphical view]
SUPFAMiSSF89963. SSF89963. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography."
    Fountoulakis M., Takacs M.-F., Berndt P., Langen H., Takacs B.
    Electrophoresis 20:2181-2195(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: B / BL21.
  5. "Structural and nucleotide-binding properties of YajQ and YnaF, two Escherichia coli proteins of unknown function."
    Saveanu C., Miron S., Borza T., Craescu C.T., Labesse G., Gagyi C., Popescu A., Schaeffer F., Namane A., Laurent-Winter C., Barzu O., Gilles A.-M.
    Protein Sci. 11:2551-2560(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBUNIT, NUCLEOTIDE BINDING.
    Strain: K12.

Entry informationi

Entry nameiYAJQ_ECOLI
AccessioniPrimary (citable) accession number: P0A8E7
Secondary accession number(s): P77482, Q2MC00
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: January 15, 2008
Last modified: March 16, 2016
This is version 82 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.