Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0227 protein YcfP

Gene

ycfP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6568-MONOMER.
ECOL316407:JW5158-MONOMER.

Protein family/group databases

ESTHERiecoli-ycfp. abh_upf00227.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0227 protein YcfP
Gene namesi
Name:ycfP
Ordered Locus Names:b1108, JW5158
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13434. ycfP.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 180180UPF0227 protein YcfPPRO_0000070316Add
BLAST

Proteomic databases

EPDiP0A8E1.
PaxDbiP0A8E1.
PRIDEiP0A8E1.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
frrP0A8052EBI-9129402,EBI-1114349
tpxP0A8623EBI-9129402,EBI-369411

Protein-protein interaction databases

BioGridi4261379. 266 interactions.
DIPiDIP-48123N.
IntActiP0A8E1. 4 interactions.
STRINGi511145.b1108.

Structurei

3D structure databases

ProteinModelPortaliP0A8E1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0227 family.Curated

Phylogenomic databases

eggNOGiENOG4105D0Y. Bacteria.
COG3150. LUCA.
HOGENOMiHOG000279089.
KOiK07000.
OMAiKCVSEFR.
OrthoDBiEOG69974C.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
HAMAPiMF_01047. UPF0227.
InterProiIPR029058. AB_hydrolase.
IPR022987. UPF0227.
IPR008886. UPF0227/Esterase_YqiA.
[Graphical view]
PfamiPF05728. UPF0227. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A8E1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIYLHGFDS NSPGNHEKVL QLQFIDPDVR LISYSTRHPK HDMQHLLKEV
60 70 80 90 100
DKMLQLNVDE RPLICGVGLG GYWAERIGFL CDIRQVIFNP NLFPYENMEG
110 120 130 140 150
KIDRPEEYAD IATKCVTNFR EKNRDRCLVI LSRNDEALNS QRTSEELHHY
160 170 180
YEIVWDEEQT HKFKNISPHL QRIKAFKTLG
Length:180
Mass (Da):21,226
Last modified:June 7, 2005 - v1
Checksum:i9C1A6987DB63AB7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74192.2.
AP009048 Genomic DNA. Translation: BAA35915.2.
PIRiA64855.
RefSeqiNP_415626.4. NC_000913.3.
WP_000587933.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74192; AAC74192; b1108.
BAA35915; BAA35915; BAA35915.
GeneIDi945676.
KEGGiecj:JW5158.
eco:b1108.
PATRICi32117459. VBIEscCol129921_1152.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74192.2.
AP009048 Genomic DNA. Translation: BAA35915.2.
PIRiA64855.
RefSeqiNP_415626.4. NC_000913.3.
WP_000587933.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A8E1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261379. 266 interactions.
DIPiDIP-48123N.
IntActiP0A8E1. 4 interactions.
STRINGi511145.b1108.

Protein family/group databases

ESTHERiecoli-ycfp. abh_upf00227.

Proteomic databases

EPDiP0A8E1.
PaxDbiP0A8E1.
PRIDEiP0A8E1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74192; AAC74192; b1108.
BAA35915; BAA35915; BAA35915.
GeneIDi945676.
KEGGiecj:JW5158.
eco:b1108.
PATRICi32117459. VBIEscCol129921_1152.

Organism-specific databases

EchoBASEiEB3208.
EcoGeneiEG13434. ycfP.

Phylogenomic databases

eggNOGiENOG4105D0Y. Bacteria.
COG3150. LUCA.
HOGENOMiHOG000279089.
KOiK07000.
OMAiKCVSEFR.
OrthoDBiEOG69974C.

Enzyme and pathway databases

BioCyciEcoCyc:G6568-MONOMER.
ECOL316407:JW5158-MONOMER.

Miscellaneous databases

PROiP0A8E1.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
HAMAPiMF_01047. UPF0227.
InterProiIPR029058. AB_hydrolase.
IPR022987. UPF0227.
IPR008886. UPF0227/Esterase_YqiA.
[Graphical view]
PfamiPF05728. UPF0227. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYCFP_ECOLI
AccessioniPrimary (citable) accession number: P0A8E1
Secondary accession number(s): P75950
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: March 16, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.