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P0A8C4

- YGFB_ECOLI

UniProt

P0A8C4 - YGFB_ECOLI

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Protein
UPF0149 protein YgfB
Gene
ygfB, b2909, JW5473
Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11323-MONOMER.
ECOL316407:JW5473-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0149 protein YgfB
Gene namesi
Name:ygfB
Ordered Locus Names:b2909, JW5473
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG11323. ygfB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 192192UPF0149 protein YgfBUniRule annotation
PRO_0000207558Add
BLAST

Proteomic databases

PaxDbiP0A8C4.
PRIDEiP0A8C4.

PTM databases

PhosSiteiP0810454.

Expressioni

Gene expression databases

GenevestigatoriP0A8C4.

Interactioni

Protein-protein interaction databases

DIPiDIP-48191N.
IntActiP0A8C4. 7 interactions.
STRINGi511145.b2909.

Structurei

3D structure databases

ProteinModelPortaliP0A8C4.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0149 family.

Phylogenomic databases

eggNOGiCOG3079.
HOGENOMiHOG000276031.
KOiK09895.
OMAiELMNDGQ.
OrthoDBiEOG6358FQ.

Family and domain databases

HAMAPiMF_00346. UPF0149.
InterProiIPR011978. UPF0149.
[Graphical view]
PfamiPF03695. UPF0149. 1 hit.
[Graphical view]
SUPFAMiSSF101327. SSF101327. 1 hit.
TIGRFAMsiTIGR02292. ygfB_yecA. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A8C4-1 [UniParc]FASTAAdd to Basket

« Hide

MSIQNEMPGY NEMNQYLNQQ GTGLTPAEMH GLISGMICGG NDDSSWLPLL    50
HDLTNEGMAF GHELAQALRK MHSATSDALQ DDGFLFQLYL PDGDDVSVFD 100
RADALAGWVN HFLLGLGVTQ PKLDKVTGET GEAIDDLRNI AQLGYDEDED 150
QEELEMSLEE IIEYVRVAAL LCHDTFTHPQ PTAPEVQKPT LH 192
Length:192
Mass (Da):21,230
Last modified:June 7, 2005 - v1
Checksum:iD60ADE6A901FB7D7
GO

Sequence cautioni

The sequence AAA69077.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.
The sequence BAA14324.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D90281 Genomic DNA. Translation: BAA14324.1. Different initiation.
U28377 Genomic DNA. Translation: AAA69077.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75947.2.
AP009048 Genomic DNA. Translation: BAE76974.1.
PIRiA47020.
RefSeqiNP_417385.4. NC_000913.3.
YP_491110.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75947; AAC75947; b2909.
BAE76974; BAE76974; BAE76974.
GeneIDi12930243.
947400.
KEGGiecj:Y75_p2841.
eco:b2909.
PATRICi32121232. VBIEscCol129921_3004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D90281 Genomic DNA. Translation: BAA14324.1 . Different initiation.
U28377 Genomic DNA. Translation: AAA69077.1 . Different initiation.
U00096 Genomic DNA. Translation: AAC75947.2 .
AP009048 Genomic DNA. Translation: BAE76974.1 .
PIRi A47020.
RefSeqi NP_417385.4. NC_000913.3.
YP_491110.1. NC_007779.1.

3D structure databases

ProteinModelPortali P0A8C4.
ModBasei Search...

Protein-protein interaction databases

DIPi DIP-48191N.
IntActi P0A8C4. 7 interactions.
STRINGi 511145.b2909.

PTM databases

PhosSitei P0810454.

Proteomic databases

PaxDbi P0A8C4.
PRIDEi P0A8C4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75947 ; AAC75947 ; b2909 .
BAE76974 ; BAE76974 ; BAE76974 .
GeneIDi 12930243.
947400.
KEGGi ecj:Y75_p2841.
eco:b2909.
PATRICi 32121232. VBIEscCol129921_3004.

Organism-specific databases

EchoBASEi EB1299.
EcoGenei EG11323. ygfB.

Phylogenomic databases

eggNOGi COG3079.
HOGENOMi HOG000276031.
KOi K09895.
OMAi ELMNDGQ.
OrthoDBi EOG6358FQ.

Enzyme and pathway databases

BioCyci EcoCyc:EG11323-MONOMER.
ECOL316407:JW5473-MONOMER.

Miscellaneous databases

PROi P0A8C4.

Gene expression databases

Genevestigatori P0A8C4.

Family and domain databases

HAMAPi MF_00346. UPF0149.
InterProi IPR011978. UPF0149.
[Graphical view ]
Pfami PF03695. UPF0149. 1 hit.
[Graphical view ]
SUPFAMi SSF101327. SSF101327. 1 hit.
TIGRFAMsi TIGR02292. ygfB_yecA. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation and characterization of a light-sensitive mutant of Escherichia coli K-12 with a mutation in a gene that is required for the biosynthesis of ubiquinone."
    Nakahigashi K., Miyamoto K., Nishimura K., Inokuchi H.
    J. Bacteriol. 174:7352-7359(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 33694 / HB101.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGFB_ECOLI
AccessioniPrimary (citable) accession number: P0A8C4
Secondary accession number(s): P25533, Q2M9T2, Q8XD28
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: June 11, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

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