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Protein

UPF0145 protein YbjQ

Gene

ybjQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6451-MONOMER.
ECOL316407:JW0850-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0145 protein YbjQ
Gene namesi
Name:ybjQ
Ordered Locus Names:b0866, JW0850
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13686. ybjQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001384651 – 107UPF0145 protein YbjQAdd BLAST107

Proteomic databases

PaxDbiP0A8C1.
PRIDEiP0A8C1.

Interactioni

Protein-protein interaction databases

BioGridi4263135. 10 interactors.
DIPiDIP-48266N.
IntActiP0A8C1. 1 interactor.
STRINGi511145.b0866.

Structurei

3D structure databases

ProteinModelPortaliP0A8C1.
SMRiP0A8C1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0145 family.Curated

Phylogenomic databases

eggNOGiENOG4105K8R. Bacteria.
COG0393. LUCA.
HOGENOMiHOG000217614.
InParanoidiP0A8C1.
OMAiIREYRGI.
PhylomeDBiP0A8C1.

Family and domain databases

Gene3Di3.30.110.70. 1 hit.
HAMAPiMF_00338. UPF0145. 1 hit.
InterProiIPR002765. UPF0145.
[Graphical view]
PfamiPF01906. YbjQ_1. 1 hit.
[Graphical view]
SUPFAMiSSF117782. SSF117782. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A8C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQFSTTPTLE GQTIVEYCGV VTGEAILGAN IFRDFFAGIR DIVGGRSGAY
60 70 80 90 100
EKELRKAREI AFEELGSQAR ALGADAVVGI DIDYETVGQN GSMLMVSVSG

TAVKTRR
Length:107
Mass (Da):11,437
Last modified:June 7, 2005 - v1
Checksum:i23C02AD23D0E4429
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73953.1.
AP009048 Genomic DNA. Translation: BAA35580.1.
PIRiB64825.
RefSeqiNP_415387.1. NC_000913.3.
WP_001160737.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73953; AAC73953; b0866.
BAA35580; BAA35580; BAA35580.
GeneIDi945493.
KEGGiecj:JW0850.
eco:b0866.
PATRICi32116939. VBIEscCol129921_0895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73953.1.
AP009048 Genomic DNA. Translation: BAA35580.1.
PIRiB64825.
RefSeqiNP_415387.1. NC_000913.3.
WP_001160737.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A8C1.
SMRiP0A8C1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263135. 10 interactors.
DIPiDIP-48266N.
IntActiP0A8C1. 1 interactor.
STRINGi511145.b0866.

Proteomic databases

PaxDbiP0A8C1.
PRIDEiP0A8C1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73953; AAC73953; b0866.
BAA35580; BAA35580; BAA35580.
GeneIDi945493.
KEGGiecj:JW0850.
eco:b0866.
PATRICi32116939. VBIEscCol129921_0895.

Organism-specific databases

EchoBASEiEB3450.
EcoGeneiEG13686. ybjQ.

Phylogenomic databases

eggNOGiENOG4105K8R. Bacteria.
COG0393. LUCA.
HOGENOMiHOG000217614.
InParanoidiP0A8C1.
OMAiIREYRGI.
PhylomeDBiP0A8C1.

Enzyme and pathway databases

BioCyciEcoCyc:G6451-MONOMER.
ECOL316407:JW0850-MONOMER.

Miscellaneous databases

PROiP0A8C1.

Family and domain databases

Gene3Di3.30.110.70. 1 hit.
HAMAPiMF_00338. UPF0145. 1 hit.
InterProiIPR002765. UPF0145.
[Graphical view]
PfamiPF01906. YbjQ_1. 1 hit.
[Graphical view]
SUPFAMiSSF117782. SSF117782. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBJQ_ECOLI
AccessioniPrimary (citable) accession number: P0A8C1
Secondary accession number(s): P75819
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: November 2, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.