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Protein

Probable transcriptional regulatory protein YeeN

Gene

yeeN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7068-MONOMER.
ECOL316407:JW1964-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transcriptional regulatory protein YeeNUniRule annotation
Gene namesi
Name:yeeNUniRule annotation
Ordered Locus Names:b1983, JW1964
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13382. yeeN.

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 238238Probable transcriptional regulatory protein YeeNPRO_0000175803Add
BLAST

Proteomic databases

PaxDbiP0A8A2.
PRIDEiP0A8A2.

Interactioni

Protein-protein interaction databases

BioGridi4259159. 39 interactions.
DIPiDIP-36184N.
IntActiP0A8A2. 22 interactions.
STRINGi511145.b1983.

Structurei

3D structure databases

ProteinModelPortaliP0A8A2.
SMRiP0A8A2. Positions 4-234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TACO1 family. YeeN subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CDY. Bacteria.
COG0217. LUCA.
HOGENOMiHOG000228371.
InParanoidiP0A8A2.
OMAiMKRWGNM.
PhylomeDBiP0A8A2.

Family and domain databases

Gene3Di1.10.10.200. 1 hit.
3.30.1270.10. 2 hits.
3.30.70.980. 1 hit.
HAMAPiMF_00693. Transcrip_reg_TACO1. 1 hit.
MF_00918. Transcrip_reg_TACO1_YeeN. 1 hit.
InterProiIPR017856. Integrase_Zn-bd_dom-like_N.
IPR002876. Transcrip_reg_TACO1-like.
IPR026563. Transcrip_reg_TACO1-like_dom2.
IPR026564. Transcrip_reg_TACO1-like_dom3.
IPR026562. Transcrip_reg_TACO1_YeeN.
IPR029072. YebC-like.
[Graphical view]
PANTHERiPTHR12532. PTHR12532. 1 hit.
PfamiPF01709. Transcrip_reg. 1 hit.
[Graphical view]
SUPFAMiSSF75625. SSF75625. 1 hit.
TIGRFAMsiTIGR01033. TIGR01033. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A8A2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKWANIVA KKTAKDGATS KIYAKFGVEI YAAAKQGEPD PELNTSLKFV
60 70 80 90 100
IERAKQAQVP KHVIDKAIDK AKGGGDETFV QGRYEGFGPN GSMIIAETLT
110 120 130 140 150
SNVNRTIANV RTIFNKKGGN IGAAGSVSYM FDNTGVIVFK GTDPDHIFEI
160 170 180 190 200
LLEAEVDVRD VTEEEGNIVI YTEPTDLHKG IAALKAAGIT EFSTTELEMI
210 220 230
AQSEVELSPE DLEIFEGLVD ALEDDDDVQK VYHNVANL
Length:238
Mass (Da):25,867
Last modified:June 7, 2005 - v1
Checksum:iF467DCB73A8FF7CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75047.1.
AP009048 Genomic DNA. Translation: BAA15803.2.
PIRiA64963.
RefSeqiNP_416490.1. NC_000913.3.
WP_000532923.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75047; AAC75047; b1983.
BAA15803; BAA15803; BAA15803.
GeneIDi946493.
KEGGiecj:JW1964.
eco:b1983.
PATRICi32119297. VBIEscCol129921_2061.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75047.1.
AP009048 Genomic DNA. Translation: BAA15803.2.
PIRiA64963.
RefSeqiNP_416490.1. NC_000913.3.
WP_000532923.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0A8A2.
SMRiP0A8A2. Positions 4-234.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259159. 39 interactions.
DIPiDIP-36184N.
IntActiP0A8A2. 22 interactions.
STRINGi511145.b1983.

Proteomic databases

PaxDbiP0A8A2.
PRIDEiP0A8A2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75047; AAC75047; b1983.
BAA15803; BAA15803; BAA15803.
GeneIDi946493.
KEGGiecj:JW1964.
eco:b1983.
PATRICi32119297. VBIEscCol129921_2061.

Organism-specific databases

EchoBASEiEB3163.
EcoGeneiEG13382. yeeN.

Phylogenomic databases

eggNOGiENOG4105CDY. Bacteria.
COG0217. LUCA.
HOGENOMiHOG000228371.
InParanoidiP0A8A2.
OMAiMKRWGNM.
PhylomeDBiP0A8A2.

Enzyme and pathway databases

BioCyciEcoCyc:G7068-MONOMER.
ECOL316407:JW1964-MONOMER.

Miscellaneous databases

PROiP0A8A2.

Family and domain databases

Gene3Di1.10.10.200. 1 hit.
3.30.1270.10. 2 hits.
3.30.70.980. 1 hit.
HAMAPiMF_00693. Transcrip_reg_TACO1. 1 hit.
MF_00918. Transcrip_reg_TACO1_YeeN. 1 hit.
InterProiIPR017856. Integrase_Zn-bd_dom-like_N.
IPR002876. Transcrip_reg_TACO1-like.
IPR026563. Transcrip_reg_TACO1-like_dom2.
IPR026564. Transcrip_reg_TACO1-like_dom3.
IPR026562. Transcrip_reg_TACO1_YeeN.
IPR029072. YebC-like.
[Graphical view]
PANTHERiPTHR12532. PTHR12532. 1 hit.
PfamiPF01709. Transcrip_reg. 1 hit.
[Graphical view]
SUPFAMiSSF75625. SSF75625. 1 hit.
TIGRFAMsiTIGR01033. TIGR01033. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYEEN_ECOLI
AccessioniPrimary (citable) accession number: P0A8A2
Secondary accession number(s): P76351, P94751
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: June 7, 2005
Last modified: September 7, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.