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Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Involved in the binding of tRNA to the ribosomes.

GO - Molecular functioni

GO - Biological processi

  • transcription antitermination Source: EcoCyc
  • translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciEcoCyc:EG10909-MONOMER.
ECOL316407:JW3283-MONOMER.
MetaCyc:EG10909-MONOMER.

Protein family/group databases

MoonProtiP0A7R5.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S10
Gene namesi
Name:rpsJ
Synonyms:nusE
Ordered Locus Names:b3321, JW3283
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10909. rpsJ.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
  • cytosolic small ribosomal subunit Source: EcoliWiki
Complete GO annotation...

Pathology & Biotechi

Chemistry databases

DrugBankiDB00698. Nitrofurantoin.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001465291 – 10330S ribosomal protein S10Add BLAST103

Proteomic databases

EPDiP0A7R5.
PaxDbiP0A7R5.
PRIDEiP0A7R5.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
nusBP0A7805EBI-544602,EBI-555387
rsuAP0AA432EBI-544602,EBI-557810

Protein-protein interaction databases

BioGridi852128. 1 interactor.
DIPiDIP-35797N.
IntActiP0A7R5. 98 interactors.
MINTiMINT-1283940.
STRINGi511145.b3321.

Structurei

Secondary structure

1103
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi5 – 13Combined sources9
Helixi15 – 30Combined sources16
Turni31 – 33Combined sources3
Beta strandi35 – 45Combined sources11
Beta strandi69 – 78Combined sources10
Helixi81 – 89Combined sources9
Beta strandi96 – 103Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1M5Gmodel-J5-102[»]
2KVQNMR-E1-45[»]
E68-103[»]
2YKRelectron microscopy9.80J5-102[»]
3D3BX-ray1.30J1-45[»]
J68-103[»]
3D3CX-ray2.60J/K/L1-45[»]
J/K/L68-103[»]
3IMQX-ray2.50J/K/L1-103[»]
3J9Yelectron microscopy3.90j1-103[»]
3J9Zelectron microscopy3.60SJ1-103[»]
3JA1electron microscopy3.60SJ1-103[»]
3JBUelectron microscopy3.64J1-103[»]
3JBVelectron microscopy3.32J1-103[»]
3JCDelectron microscopy3.70j1-103[»]
3JCEelectron microscopy3.20j1-103[»]
3JCJelectron microscopy3.70r1-102[»]
3JCNelectron microscopy4.60m1-102[»]
3W1YX-ray2.30C1-103[»]
4A2Ielectron microscopy16.50J5-102[»]
4ADVelectron microscopy13.50J1-103[»]
4U1UX-ray2.95AJ/CJ5-102[»]
4U1VX-ray3.00AJ/CJ5-102[»]
4U20X-ray2.90AJ/CJ5-102[»]
4U24X-ray2.90AJ/CJ5-102[»]
4U25X-ray2.90AJ/CJ5-102[»]
4U26X-ray2.80AJ/CJ5-102[»]
4U27X-ray2.80AJ/CJ5-102[»]
4V47electron microscopy12.30BJ1-103[»]
4V48electron microscopy11.50BJ1-103[»]
4V4HX-ray3.46AJ/CJ1-103[»]
4V4QX-ray3.46AJ/CJ1-103[»]
4V4Velectron microscopy15.00AJ5-100[»]
4V4Welectron microscopy15.00AJ5-100[»]
4V50X-ray3.22AJ/CJ1-103[»]
4V52X-ray3.21AJ/CJ1-103[»]
4V53X-ray3.54AJ/CJ1-103[»]
4V54X-ray3.30AJ/CJ1-103[»]
4V55X-ray4.00AJ/CJ1-103[»]
4V56X-ray3.93AJ/CJ1-103[»]
4V57X-ray3.50AJ/CJ1-103[»]
4V5BX-ray3.74BJ/DJ1-103[»]
4V5Helectron microscopy5.80AJ5-102[»]
4V5YX-ray4.45AJ/CJ1-103[»]
4V64X-ray3.50AJ/CJ1-103[»]
4V65electron microscopy9.00AX1-103[»]
4V66electron microscopy9.00AX1-103[»]
4V69electron microscopy6.70AJ5-102[»]
4V6CX-ray3.19AJ/CJ1-103[»]
4V6DX-ray3.81AJ/CJ1-103[»]
4V6EX-ray3.71AJ/CJ1-103[»]
4V6Kelectron microscopy8.25BN1-103[»]
4V6Lelectron microscopy13.20AN1-103[»]
4V6Melectron microscopy7.10AJ1-103[»]
4V6Nelectron microscopy12.10BM1-103[»]
4V6Oelectron microscopy14.70AM1-103[»]
4V6Pelectron microscopy13.50AM1-103[»]
4V6Qelectron microscopy11.50AM1-103[»]
4V6Relectron microscopy11.50AM1-103[»]
4V6Selectron microscopy13.10BL1-103[»]
4V6Telectron microscopy8.30AJ5-102[»]
4V6Velectron microscopy9.80AJ1-103[»]
4V6Yelectron microscopy12.00AJ5-102[»]
4V6Zelectron microscopy12.00AJ5-102[»]
4V70electron microscopy17.00AJ5-102[»]
4V71electron microscopy20.00AJ5-102[»]
4V72electron microscopy13.00AJ5-102[»]
4V73electron microscopy15.00AJ5-102[»]
4V74electron microscopy17.00AJ5-102[»]
4V75electron microscopy12.00AJ5-102[»]
4V76electron microscopy17.00AJ5-102[»]
4V77electron microscopy17.00AJ5-102[»]
4V78electron microscopy20.00AJ5-102[»]
4V79electron microscopy15.00AJ5-102[»]
4V7Aelectron microscopy9.00AJ5-102[»]
4V7Belectron microscopy6.80AJ1-103[»]
4V7Celectron microscopy7.60AJ1-103[»]
4V7Delectron microscopy7.60BJ1-103[»]
4V7Ielectron microscopy9.60BJ1-103[»]
4V7SX-ray3.25AJ/CJ5-102[»]
4V7TX-ray3.19AJ/CJ5-102[»]
4V7UX-ray3.10AJ/CJ5-102[»]
4V7VX-ray3.29AJ/CJ5-102[»]
4V85X-ray3.20J1-103[»]
4V89X-ray3.70AJ1-103[»]
4V9CX-ray3.30AJ/CJ1-103[»]
4V9DX-ray3.00AJ/BJ5-102[»]
4V9OX-ray2.90BJ/DJ/FJ/HJ1-103[»]
4V9PX-ray2.90BJ/DJ/FJ/HJ1-103[»]
4WF1X-ray3.09AJ/CJ5-102[»]
4WOIX-ray3.00AJ/DJ1-103[»]
4WWWX-ray3.10QJ/XJ5-102[»]
4YBBX-ray2.10AJ/BJ4-102[»]
5AFIelectron microscopy2.90j1-103[»]
5IQRelectron microscopy3.00o1-103[»]
5IT8X-ray3.12AJ/BJ4-102[»]
5J5BX-ray2.80AJ/BJ4-102[»]
5J7LX-ray3.00AJ/BJ4-102[»]
5J88X-ray3.32AJ/BJ4-102[»]
5J8AX-ray3.10AJ/BJ4-102[»]
5J91X-ray2.96AJ/BJ4-102[»]
5JC9X-ray3.03AJ/BJ4-102[»]
5JTEelectron microscopy3.60AJ1-103[»]
5JU8electron microscopy3.60AJ1-103[»]
5KCRelectron microscopy3.601j1-103[»]
5KCSelectron microscopy3.901j1-103[»]
5KPSelectron microscopy3.90151-103[»]
5KPVelectron microscopy4.10141-103[»]
5KPWelectron microscopy3.90141-103[»]
5KPXelectron microscopy3.90141-103[»]
5L3Pelectron microscopy3.70j1-103[»]
ProteinModelPortaliP0A7R5.
SMRiP0A7R5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A7R5.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S10P family.Curated

Phylogenomic databases

eggNOGiENOG4108Z10. Bacteria.
COG0051. LUCA.
HOGENOMiHOG000270246.
InParanoidiP0A7R5.
KOiK02946.
OMAiIESLMHI.
PhylomeDBiP0A7R5.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0A7R5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNQRIRIRL KAFDHRLIDQ ATAEIVETAK RTGAQVRGPI PLPTRKERFT
60 70 80 90 100
VLISPHVNKD ARDQYEIRTH LRLVDIVEPT EKTVDALMRL DLAAGVDVQI

SLG
Length:103
Mass (Da):11,736
Last modified:July 21, 1986 - v1
Checksum:iDAEB35A2557F1D59
GO

Mass spectrometryi

Molecular mass is 11734.5 Da from positions 1 - 103. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
V00344 Genomic DNA. Translation: CAA23633.1.
X02613 Genomic DNA. Translation: CAA26459.1.
U18997 Genomic DNA. Translation: AAA58118.1.
U00096 Genomic DNA. Translation: AAC76346.1.
AP009048 Genomic DNA. Translation: BAE77970.1.
AF058450 Genomic DNA. Translation: AAC14290.1.
PIRiA02720. R3EC10.
RefSeqiNP_417780.1. NC_000913.3.
WP_001181004.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76346; AAC76346; b3321.
BAE77970; BAE77970; BAE77970.
GeneIDi947816.
KEGGiecj:JW3283.
eco:b3321.
PATRICi32122074. VBIEscCol129921_3414.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
V00344 Genomic DNA. Translation: CAA23633.1.
X02613 Genomic DNA. Translation: CAA26459.1.
U18997 Genomic DNA. Translation: AAA58118.1.
U00096 Genomic DNA. Translation: AAC76346.1.
AP009048 Genomic DNA. Translation: BAE77970.1.
AF058450 Genomic DNA. Translation: AAC14290.1.
PIRiA02720. R3EC10.
RefSeqiNP_417780.1. NC_000913.3.
WP_001181004.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1M5Gmodel-J5-102[»]
2KVQNMR-E1-45[»]
E68-103[»]
2YKRelectron microscopy9.80J5-102[»]
3D3BX-ray1.30J1-45[»]
J68-103[»]
3D3CX-ray2.60J/K/L1-45[»]
J/K/L68-103[»]
3IMQX-ray2.50J/K/L1-103[»]
3J9Yelectron microscopy3.90j1-103[»]
3J9Zelectron microscopy3.60SJ1-103[»]
3JA1electron microscopy3.60SJ1-103[»]
3JBUelectron microscopy3.64J1-103[»]
3JBVelectron microscopy3.32J1-103[»]
3JCDelectron microscopy3.70j1-103[»]
3JCEelectron microscopy3.20j1-103[»]
3JCJelectron microscopy3.70r1-102[»]
3JCNelectron microscopy4.60m1-102[»]
3W1YX-ray2.30C1-103[»]
4A2Ielectron microscopy16.50J5-102[»]
4ADVelectron microscopy13.50J1-103[»]
4U1UX-ray2.95AJ/CJ5-102[»]
4U1VX-ray3.00AJ/CJ5-102[»]
4U20X-ray2.90AJ/CJ5-102[»]
4U24X-ray2.90AJ/CJ5-102[»]
4U25X-ray2.90AJ/CJ5-102[»]
4U26X-ray2.80AJ/CJ5-102[»]
4U27X-ray2.80AJ/CJ5-102[»]
4V47electron microscopy12.30BJ1-103[»]
4V48electron microscopy11.50BJ1-103[»]
4V4HX-ray3.46AJ/CJ1-103[»]
4V4QX-ray3.46AJ/CJ1-103[»]
4V4Velectron microscopy15.00AJ5-100[»]
4V4Welectron microscopy15.00AJ5-100[»]
4V50X-ray3.22AJ/CJ1-103[»]
4V52X-ray3.21AJ/CJ1-103[»]
4V53X-ray3.54AJ/CJ1-103[»]
4V54X-ray3.30AJ/CJ1-103[»]
4V55X-ray4.00AJ/CJ1-103[»]
4V56X-ray3.93AJ/CJ1-103[»]
4V57X-ray3.50AJ/CJ1-103[»]
4V5BX-ray3.74BJ/DJ1-103[»]
4V5Helectron microscopy5.80AJ5-102[»]
4V5YX-ray4.45AJ/CJ1-103[»]
4V64X-ray3.50AJ/CJ1-103[»]
4V65electron microscopy9.00AX1-103[»]
4V66electron microscopy9.00AX1-103[»]
4V69electron microscopy6.70AJ5-102[»]
4V6CX-ray3.19AJ/CJ1-103[»]
4V6DX-ray3.81AJ/CJ1-103[»]
4V6EX-ray3.71AJ/CJ1-103[»]
4V6Kelectron microscopy8.25BN1-103[»]
4V6Lelectron microscopy13.20AN1-103[»]
4V6Melectron microscopy7.10AJ1-103[»]
4V6Nelectron microscopy12.10BM1-103[»]
4V6Oelectron microscopy14.70AM1-103[»]
4V6Pelectron microscopy13.50AM1-103[»]
4V6Qelectron microscopy11.50AM1-103[»]
4V6Relectron microscopy11.50AM1-103[»]
4V6Selectron microscopy13.10BL1-103[»]
4V6Telectron microscopy8.30AJ5-102[»]
4V6Velectron microscopy9.80AJ1-103[»]
4V6Yelectron microscopy12.00AJ5-102[»]
4V6Zelectron microscopy12.00AJ5-102[»]
4V70electron microscopy17.00AJ5-102[»]
4V71electron microscopy20.00AJ5-102[»]
4V72electron microscopy13.00AJ5-102[»]
4V73electron microscopy15.00AJ5-102[»]
4V74electron microscopy17.00AJ5-102[»]
4V75electron microscopy12.00AJ5-102[»]
4V76electron microscopy17.00AJ5-102[»]
4V77electron microscopy17.00AJ5-102[»]
4V78electron microscopy20.00AJ5-102[»]
4V79electron microscopy15.00AJ5-102[»]
4V7Aelectron microscopy9.00AJ5-102[»]
4V7Belectron microscopy6.80AJ1-103[»]
4V7Celectron microscopy7.60AJ1-103[»]
4V7Delectron microscopy7.60BJ1-103[»]
4V7Ielectron microscopy9.60BJ1-103[»]
4V7SX-ray3.25AJ/CJ5-102[»]
4V7TX-ray3.19AJ/CJ5-102[»]
4V7UX-ray3.10AJ/CJ5-102[»]
4V7VX-ray3.29AJ/CJ5-102[»]
4V85X-ray3.20J1-103[»]
4V89X-ray3.70AJ1-103[»]
4V9CX-ray3.30AJ/CJ1-103[»]
4V9DX-ray3.00AJ/BJ5-102[»]
4V9OX-ray2.90BJ/DJ/FJ/HJ1-103[»]
4V9PX-ray2.90BJ/DJ/FJ/HJ1-103[»]
4WF1X-ray3.09AJ/CJ5-102[»]
4WOIX-ray3.00AJ/DJ1-103[»]
4WWWX-ray3.10QJ/XJ5-102[»]
4YBBX-ray2.10AJ/BJ4-102[»]
5AFIelectron microscopy2.90j1-103[»]
5IQRelectron microscopy3.00o1-103[»]
5IT8X-ray3.12AJ/BJ4-102[»]
5J5BX-ray2.80AJ/BJ4-102[»]
5J7LX-ray3.00AJ/BJ4-102[»]
5J88X-ray3.32AJ/BJ4-102[»]
5J8AX-ray3.10AJ/BJ4-102[»]
5J91X-ray2.96AJ/BJ4-102[»]
5JC9X-ray3.03AJ/BJ4-102[»]
5JTEelectron microscopy3.60AJ1-103[»]
5JU8electron microscopy3.60AJ1-103[»]
5KCRelectron microscopy3.601j1-103[»]
5KCSelectron microscopy3.901j1-103[»]
5KPSelectron microscopy3.90151-103[»]
5KPVelectron microscopy4.10141-103[»]
5KPWelectron microscopy3.90141-103[»]
5KPXelectron microscopy3.90141-103[»]
5L3Pelectron microscopy3.70j1-103[»]
ProteinModelPortaliP0A7R5.
SMRiP0A7R5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi852128. 1 interactor.
DIPiDIP-35797N.
IntActiP0A7R5. 98 interactors.
MINTiMINT-1283940.
STRINGi511145.b3321.

Chemistry databases

DrugBankiDB00698. Nitrofurantoin.

Protein family/group databases

MoonProtiP0A7R5.

Proteomic databases

EPDiP0A7R5.
PaxDbiP0A7R5.
PRIDEiP0A7R5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76346; AAC76346; b3321.
BAE77970; BAE77970; BAE77970.
GeneIDi947816.
KEGGiecj:JW3283.
eco:b3321.
PATRICi32122074. VBIEscCol129921_3414.

Organism-specific databases

EchoBASEiEB0902.
EcoGeneiEG10909. rpsJ.

Phylogenomic databases

eggNOGiENOG4108Z10. Bacteria.
COG0051. LUCA.
HOGENOMiHOG000270246.
InParanoidiP0A7R5.
KOiK02946.
OMAiIESLMHI.
PhylomeDBiP0A7R5.

Enzyme and pathway databases

BioCyciEcoCyc:EG10909-MONOMER.
ECOL316407:JW3283-MONOMER.
MetaCyc:EG10909-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP0A7R5.
PROiP0A7R5.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS10_ECOLI
AccessioniPrimary (citable) accession number: P0A7R5
Secondary accession number(s): P02364, Q2M6Y6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: November 30, 2016
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.