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Protein

50S ribosomal protein L35

Gene

rpmI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: EcoCyc

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciEcoCyc:EG11231-MONOMER
MetaCyc:EG11231-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L35
Alternative name(s):
Large ribosomal subunit protein bL351 Publication
Ribosomal protein A
Gene namesi
Name:rpmI
Ordered Locus Names:b1717, JW1707
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11231 rpmI

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved2 Publications
ChainiPRO_00001773592 – 6550S ribosomal protein L35Add BLAST64

Proteomic databases

EPDiP0A7Q1
PaxDbiP0A7Q1
PRIDEiP0A7Q1

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.9 Publications

Protein-protein interaction databases

BioGridi4262931, 88 interactors
IntActiP0A7Q1, 4 interactors
STRINGi316385.ECDH10B_1853

Structurei

Secondary structure

165
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi8 – 13Combined sources6
Beta strandi22 – 24Combined sources3
Turni33 – 35Combined sources3
Helixi38 – 44Combined sources7
Turni52 – 54Combined sources3
Helixi55 – 61Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2J28electron microscopy8.0032-65[»]
2RDOelectron microscopy9.1032-65[»]
3BBXelectron microscopy10.0032-65[»]
3J5Lelectron microscopy6.6032-65[»]
3J7Zelectron microscopy3.9031-65[»]
3J8Gelectron microscopy5.0071-65[»]
3J9Yelectron microscopy3.9031-65[»]
3J9Zelectron microscopy3.60L42-65[»]
3JA1electron microscopy3.60L62-65[»]
3JBUelectron microscopy3.6471-65[»]
3JBVelectron microscopy3.3271-65[»]
3JCDelectron microscopy3.7032-65[»]
3JCEelectron microscopy3.2031-65[»]
3JCJelectron microscopy3.70c1-65[»]
3JCNelectron microscopy4.6031-65[»]
4CSUelectron microscopy5.5072-65[»]
4U1UX-ray2.95B3/D32-65[»]
4U1VX-ray3.00B3/D32-65[»]
4U20X-ray2.90B3/D32-65[»]
4U24X-ray2.90B3/D32-65[»]
4U25X-ray2.90B3/D32-65[»]
4U26X-ray2.80B3/D32-65[»]
4U27X-ray2.80B3/D32-65[»]
4UY8electron microscopy3.8032-65[»]
4V4HX-ray3.46B3/D31-65[»]
4V4QX-ray3.46B3/D32-65[»]
4V50X-ray3.22B3/D32-65[»]
4V52X-ray3.21B3/D32-65[»]
4V53X-ray3.54B3/D32-65[»]
4V54X-ray3.30B3/D32-65[»]
4V55X-ray4.00B3/D32-65[»]
4V56X-ray3.93B3/D32-65[»]
4V57X-ray3.50B3/D32-65[»]
4V5BX-ray3.74A3/C32-65[»]
4V5Helectron microscopy5.80B72-65[»]
4V5YX-ray4.45B3/D32-65[»]
4V64X-ray3.50B3/D32-65[»]
4V65electron microscopy9.00BW2-65[»]
4V66electron microscopy9.00BW2-65[»]
4V69electron microscopy6.70B32-65[»]
4V6CX-ray3.19B3/D31-65[»]
4V6DX-ray3.81B3/D31-65[»]
4V6EX-ray3.71B3/D31-65[»]
4V6Kelectron microscopy8.25Af1-65[»]
4V6Lelectron microscopy13.20Bf1-65[»]
4V6Melectron microscopy7.10B32-65[»]
4V6Nelectron microscopy12.10A62-65[»]
4V6Oelectron microscopy14.70B62-65[»]
4V6Pelectron microscopy13.50B62-65[»]
4V6Qelectron microscopy11.50B62-65[»]
4V6Relectron microscopy11.50B62-65[»]
4V6Selectron microscopy13.10A62-65[»]
4V6Telectron microscopy8.30B32-65[»]
4V6Velectron microscopy9.80B82-65[»]
4V6Yelectron microscopy12.00B31-65[»]
4V6Zelectron microscopy12.00B31-65[»]
4V70electron microscopy17.00B31-65[»]
4V71electron microscopy20.00B31-65[»]
4V72electron microscopy13.00B31-65[»]
4V73electron microscopy15.00B31-65[»]
4V74electron microscopy17.00B31-65[»]
4V75electron microscopy12.00B31-65[»]
4V76electron microscopy17.00B31-65[»]
4V77electron microscopy17.00B31-65[»]
4V78electron microscopy20.00B31-65[»]
4V79electron microscopy15.00B31-65[»]
4V7Aelectron microscopy9.00B31-65[»]
4V7Belectron microscopy6.80B31-65[»]
4V7Celectron microscopy7.60B62-65[»]
4V7Delectron microscopy7.60A72-65[»]
4V7Ielectron microscopy9.60A31-65[»]
4V7SX-ray3.25B3/D32-65[»]
4V7TX-ray3.19B3/D32-65[»]
4V7UX-ray3.10B3/D32-65[»]
4V7VX-ray3.29B3/D32-65[»]
4V85X-ray3.2071-65[»]
4V89X-ray3.70B71-65[»]
4V9CX-ray3.30B3/D31-65[»]
4V9DX-ray3.00C3/D32-65[»]
4V9OX-ray2.90A3/C3/E3/G31-65[»]
4V9PX-ray2.90A3/C3/E3/G31-65[»]
4WF1X-ray3.09B3/D32-65[»]
4WOIX-ray3.00B3/C31-65[»]
4WWWX-ray3.10R3/Y32-65[»]
4YBBX-ray2.10C4/D42-65[»]
5ADYelectron microscopy4.5031-65[»]
5AFIelectron microscopy2.9031-65[»]
5AKAelectron microscopy5.7032-65[»]
5GADelectron microscopy3.70e1-65[»]
5GAEelectron microscopy3.33e1-65[»]
5GAFelectron microscopy4.30e2-65[»]
5GAGelectron microscopy3.80e1-65[»]
5GAHelectron microscopy3.80e1-65[»]
5H5Uelectron microscopy3.00e2-65[»]
5IQRelectron microscopy3.00e1-65[»]
5IT8X-ray3.12C4/D42-65[»]
5J5BX-ray2.80C4/D42-65[»]
5J7LX-ray3.00C4/D42-65[»]
5J88X-ray3.32C4/D42-65[»]
5J8AX-ray3.10C4/D42-65[»]
5J91X-ray2.96C4/D42-65[»]
5JC9X-ray3.03C4/D42-65[»]
5JTEelectron microscopy3.60B31-65[»]
5JU8electron microscopy3.60B31-65[»]
5KCRelectron microscopy3.60181-65[»]
5KCSelectron microscopy3.90181-65[»]
5KPSelectron microscopy3.9051-65[»]
5KPVelectron microscopy4.1041-65[»]
5KPWelectron microscopy3.9041-65[»]
5KPXelectron microscopy3.9041-65[»]
5L3Pelectron microscopy3.7081-65[»]
5LZAelectron microscopy3.6032-65[»]
5LZBelectron microscopy5.3032-65[»]
5LZCelectron microscopy4.8032-65[»]
5LZDelectron microscopy3.4032-65[»]
5LZEelectron microscopy3.5032-65[»]
5LZFelectron microscopy4.6032-65[»]
5MDVelectron microscopy2.97e1-65[»]
5MDWelectron microscopy3.06e1-65[»]
5MDYelectron microscopy3.35e1-65[»]
5MDZelectron microscopy3.10e1-65[»]
5MGPelectron microscopy3.1032-65[»]
5NCOelectron microscopy4.80e2-65[»]
5NP6electron microscopy3.6012-65[»]
5NWYelectron microscopy2.93q1-65[»]
5O2Relectron microscopy3.4032-65[»]
5U4Ielectron microscopy3.5041-65[»]
5U9Felectron microscopy3.20331-65[»]
5U9Gelectron microscopy3.20331-65[»]
5UYKelectron microscopy3.90332-65[»]
5UYLelectron microscopy3.60332-65[»]
5UYMelectron microscopy3.20332-65[»]
5UYNelectron microscopy4.00332-65[»]
5UYPelectron microscopy3.90332-65[»]
5UYQelectron microscopy3.80332-65[»]
6BU8electron microscopy3.50332-65[»]
6C4Ielectron microscopy3.2451-65[»]
6ENFelectron microscopy3.2032-65[»]
6ENJelectron microscopy3.7032-65[»]
6ENUelectron microscopy3.1032-65[»]
ProteinModelPortaliP0A7Q1
SMRiP0A7Q1
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A7Q1

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0291 LUCA
HOGENOMiHOG000040108
InParanoidiP0A7Q1
KOiK02916
OMAiPKIKTHR

Family and domain databases

HAMAPiMF_00514 Ribosomal_L35, 1 hit
InterProiView protein in InterPro
IPR021137 Ribosomal_L35
IPR018265 Ribosomal_L35_CS
IPR001706 Ribosomal_L35_non-mt
IPR037229 Ribosomal_L35_sf
PANTHERiPTHR33343 PTHR33343, 1 hit
PfamiView protein in Pfam
PF01632 Ribosomal_L35p, 1 hit
PRINTSiPR00064 RIBOSOMALL35
SUPFAMiSSF143034 SSF143034, 1 hit
TIGRFAMsiTIGR00001 rpmI_bact, 1 hit
PROSITEiView protein in PROSITE
PS00936 RIBOSOMAL_L35, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0A7Q1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKIKTVRGA AKRFKKTGKG GFKHKHANLR HILTKKATKR KRHLRPKAMV
60
SKGDLGLVIA CLPYA
Length:65
Mass (Da):7,289
Last modified:January 23, 2007 - v2
Checksum:i98A72C0AD6CE0A07
GO

Sequence cautioni

The sequence V00291 differs from that shown. Reason: Frameshift at position 6.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti11A → G AA sequence (PubMed:3298224).Curated1
Sequence conflicti11A → S in V00291 (PubMed:6325158).Curated1
Sequence conflicti28N → D AA sequence (PubMed:3542048).Curated1

Mass spectrometryi

Molecular mass is 7158.0 Da from positions 2 - 65. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
V00291 Genomic DNA No translation available.
U00096 Genomic DNA Translation: AAC74787.1
AP009048 Genomic DNA Translation: BAA15484.1
PIRiE64930 R5EC35
RefSeqiNP_416232.3, NC_000913.3
WP_001124225.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74787; AAC74787; b1717
BAA15484; BAA15484; BAA15484
GeneIDi35809335
946349
KEGGiecj:JW1707
eco:b1717
PATRICifig|1411691.4.peg.540

Similar proteinsi

Entry informationi

Entry nameiRL35_ECOLI
AccessioniPrimary (citable) accession number: P0A7Q1
Secondary accession number(s): P07085, P78275
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: January 23, 2007
Last modified: April 25, 2018
This is version 124 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

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