Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L34

Gene

rpmH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciEcoCyc:EG10892-MONOMER.
MetaCyc:EG10892-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L34
Alternative name(s):
Large ribosomal subunit protein bL341 Publication
Gene namesi
Name:rpmH
Synonyms:rimA, ssaF
Ordered Locus Names:b3703, JW3680
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10892. rpmH.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001873771 – 4650S ribosomal protein L34Add BLAST46

Proteomic databases

PaxDbiP0A7P5.
PRIDEiP0A7P5.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.8 Publications

Protein-protein interaction databases

DIPiDIP-581N.
IntActiP0A7P5. 3 interactors.
STRINGi316385.ECDH10B_3889.

Structurei

Secondary structure

146
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi9 – 16Combined sources8
Helixi18 – 22Combined sources5
Helixi25 – 36Combined sources12

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2J28electron microscopy8.0021-46[»]
2RDOelectron microscopy9.1021-46[»]
3BBXelectron microscopy10.0021-46[»]
3J5Lelectron microscopy6.6021-46[»]
3J7Zelectron microscopy3.9021-46[»]
3J8Gelectron microscopy5.0061-46[»]
3J9Yelectron microscopy3.9021-46[»]
3J9Zelectron microscopy3.60L31-46[»]
3JA1electron microscopy3.60L51-46[»]
3JBUelectron microscopy3.6461-46[»]
3JBVelectron microscopy3.3261-46[»]
3JCDelectron microscopy3.7021-46[»]
3JCEelectron microscopy3.2021-46[»]
3JCJelectron microscopy3.70b1-46[»]
3JCNelectron microscopy4.6021-46[»]
4CSUelectron microscopy5.5061-46[»]
4U1UX-ray2.95B2/D21-46[»]
4U1VX-ray3.00B2/D21-46[»]
4U20X-ray2.90B2/D21-46[»]
4U24X-ray2.90B2/D21-46[»]
4U25X-ray2.90B2/D21-46[»]
4U26X-ray2.80B2/D21-46[»]
4U27X-ray2.80B2/D21-46[»]
4UY8electron microscopy3.8021-46[»]
4V4HX-ray3.46B2/D21-46[»]
4V4QX-ray3.46B2/D21-46[»]
4V50X-ray3.22B2/D21-46[»]
4V52X-ray3.21B2/D21-46[»]
4V53X-ray3.54B2/D21-46[»]
4V54X-ray3.30B2/D21-46[»]
4V55X-ray4.00B2/D21-46[»]
4V56X-ray3.93B2/D21-46[»]
4V57X-ray3.50B2/D21-46[»]
4V5BX-ray3.74A2/C21-46[»]
4V5Helectron microscopy5.80B61-46[»]
4V5YX-ray4.45B2/D21-46[»]
4V64X-ray3.50B2/D21-46[»]
4V65electron microscopy9.00BV1-46[»]
4V66electron microscopy9.00BV1-46[»]
4V69electron microscopy6.70B21-46[»]
4V6CX-ray3.19B2/D21-46[»]
4V6DX-ray3.81B2/D21-46[»]
4V6EX-ray3.71B2/D21-46[»]
4V6Kelectron microscopy8.25Ae1-46[»]
4V6Lelectron microscopy13.20Be1-46[»]
4V6Melectron microscopy7.10B21-46[»]
4V6Nelectron microscopy12.10A51-46[»]
4V6Oelectron microscopy14.70B51-46[»]
4V6Pelectron microscopy13.50B51-46[»]
4V6Qelectron microscopy11.50B51-46[»]
4V6Relectron microscopy11.50B51-46[»]
4V6Selectron microscopy13.10A51-46[»]
4V6Telectron microscopy8.30B21-46[»]
4V6Velectron microscopy9.80B71-46[»]
4V6Yelectron microscopy12.00B21-46[»]
4V6Zelectron microscopy12.00B21-46[»]
4V70electron microscopy17.00B21-46[»]
4V71electron microscopy20.00B21-46[»]
4V72electron microscopy13.00B21-46[»]
4V73electron microscopy15.00B21-46[»]
4V74electron microscopy17.00B21-46[»]
4V75electron microscopy12.00B21-46[»]
4V76electron microscopy17.00B21-46[»]
4V77electron microscopy17.00B21-46[»]
4V78electron microscopy20.00B21-46[»]
4V79electron microscopy15.00B21-46[»]
4V7Aelectron microscopy9.00B21-46[»]
4V7Belectron microscopy6.80B21-46[»]
4V7Celectron microscopy7.60B51-46[»]
4V7Delectron microscopy7.60A61-46[»]
4V7Ielectron microscopy9.60A21-46[»]
4V7SX-ray3.25B2/D21-46[»]
4V7TX-ray3.19B2/D21-46[»]
4V7UX-ray3.10B2/D21-46[»]
4V7VX-ray3.29B2/D21-46[»]
4V85X-ray3.2061-46[»]
4V89X-ray3.70B61-46[»]
4V9CX-ray3.30B2/D21-46[»]
4V9DX-ray3.00C2/D21-46[»]
4V9OX-ray2.90A2/C2/E2/G21-46[»]
4V9PX-ray2.90A2/C2/E2/G21-46[»]
4WF1X-ray3.09B2/D21-46[»]
4WOIX-ray3.00B2/C21-46[»]
4WWWX-ray3.10R2/Y21-46[»]
4YBBX-ray2.10C3/D31-46[»]
5ADYelectron microscopy4.5021-46[»]
5AFIelectron microscopy2.9021-46[»]
5AKAelectron microscopy5.7021-46[»]
5GADelectron microscopy3.70d1-46[»]
5GAEelectron microscopy3.33d1-46[»]
5GAFelectron microscopy4.30d1-46[»]
5GAGelectron microscopy3.80d1-46[»]
5GAHelectron microscopy3.80d1-46[»]
5H5Uelectron microscopy3.00d1-46[»]
5IQRelectron microscopy3.00d1-46[»]
5IT8X-ray3.12C3/D31-46[»]
5J5BX-ray2.80C3/D31-46[»]
5J7LX-ray3.00C3/D31-46[»]
5J88X-ray3.32C3/D31-46[»]
5J8AX-ray3.10C3/D31-46[»]
5J91X-ray2.96C3/D31-46[»]
5JC9X-ray3.03C3/D31-46[»]
5JTEelectron microscopy3.60B21-46[»]
5JU8electron microscopy3.60B21-46[»]
5KCRelectron microscopy3.60171-46[»]
5KCSelectron microscopy3.90171-46[»]
5KPSelectron microscopy3.9041-46[»]
5KPVelectron microscopy4.1031-46[»]
5KPWelectron microscopy3.9031-46[»]
5KPXelectron microscopy3.9031-46[»]
5L3Pelectron microscopy3.7071-46[»]
5LZAelectron microscopy3.6021-46[»]
5LZBelectron microscopy5.3021-46[»]
5LZCelectron microscopy4.8021-46[»]
5LZDelectron microscopy3.4021-46[»]
5LZEelectron microscopy3.5021-46[»]
5LZFelectron microscopy4.6021-46[»]
5MDVelectron microscopy2.97d1-46[»]
5MDWelectron microscopy3.06d1-46[»]
5MDYelectron microscopy3.35d1-46[»]
5MDZelectron microscopy3.10d1-46[»]
5MGPelectron microscopy3.1021-46[»]
5NCOelectron microscopy4.80d1-46[»]
5NP6electron microscopy3.6001-46[»]
5NWYelectron microscopy2.93p1-46[»]
5O2Relectron microscopy3.4021-46[»]
5U4Ielectron microscopy3.5031-46[»]
5U9Felectron microscopy3.20321-46[»]
5U9Gelectron microscopy3.20321-46[»]
5UYKelectron microscopy3.90321-46[»]
5UYLelectron microscopy3.60321-46[»]
5UYMelectron microscopy3.20321-46[»]
5UYNelectron microscopy4.00321-46[»]
5UYPelectron microscopy3.90321-46[»]
5UYQelectron microscopy3.80321-46[»]
ProteinModelPortaliP0A7P5.
SMRiP0A7P5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A7P5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0230. LUCA.
HOGENOMiHOG000111572.
InParanoidiP0A7P5.
KOiK02914.
PhylomeDBiP0A7P5.

Family and domain databases

HAMAPiMF_00391. Ribosomal_L34. 1 hit.
InterProiView protein in InterPro
IPR000271. Ribosomal_L34.
IPR020939. Ribosomal_L34_CS.
PANTHERiPTHR14503. PTHR14503. 1 hit.
PfamiView protein in Pfam
PF00468. Ribosomal_L34. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003101. Ribosomal_L34. 1 hit.
TIGRFAMsiTIGR01030. rpmH_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00784. RIBOSOMAL_L34. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A7P5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MKRTFQPSVL KRNRSHGFRA RMATKNGRQV LARRRAKGRA RLTVSK
Length:46
Mass (Da):5,380
Last modified:July 21, 1986 - v1
Checksum:i600916E398939412
GO

Mass spectrometryi

Molecular mass is 5380.5 Da from positions 1 - 46. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J01602 Genomic DNA. Translation: AAB59148.1.
X01861 Genomic DNA. Translation: CAA25982.1.
M11056 Genomic DNA. Translation: AAA24566.1.
L10328 Genomic DNA. Translation: AAA62054.1.
U00096 Genomic DNA. Translation: AAC76726.1.
AP009048 Genomic DNA. Translation: BAE77591.1.
RefSeqiNP_418158.1. NC_000913.3.
WP_000831330.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76726; AAC76726; b3703.
BAE77591; BAE77591; BAE77591.
GeneIDi34155684.
948216.
KEGGiecj:JW3680.
eco:b3703.
PATRICifig|1411691.4.peg.3000.

Similar proteinsi

Entry informationi

Entry nameiRL34_ECOLI
AccessioniPrimary (citable) accession number: P0A7P5
Secondary accession number(s): P02437, Q2M815
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: November 22, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families