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UniProtKB - P0A7P5 (RL34_ECOLI)

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Protein

50S ribosomal protein L34

Gene

rpmH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

GO - Biological processi

Complete GO annotation...

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciEcoCyc:EG10892-MONOMER.
MetaCyc:EG10892-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L34
Alternative name(s):
Large ribosomal subunit protein bL341 Publication
Gene namesi
Name:rpmH
Synonyms:rimA, ssaF
Ordered Locus Names:b3703, JW3680
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia ›
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10892. rpmH.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001873771 – 4650S ribosomal protein L34Add BLAST46

Proteomic databases

EPDiP0A7P5.
PaxDbiP0A7P5.
PRIDEiP0A7P5.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.8 Publications

Protein-protein interaction databases

DIPiDIP-581N.
IntActiP0A7P5. 3 interactors.
STRINGi316385.ECDH10B_3889.

Structurei

Secondary structure

146
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi9 – 16Combined sources8
Helixi18 – 22Combined sources5
Helixi25 – 36Combined sources12

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2J28electron microscopy8.0021-46[»]
2RDOelectron microscopy9.1021-46[»]
3BBXelectron microscopy10.0021-46[»]
3J5Lelectron microscopy6.6021-46[»]
3J7Zelectron microscopy3.9021-46[»]
3J8Gelectron microscopy5.0061-46[»]
3J9Yelectron microscopy3.9021-46[»]
3J9Zelectron microscopy3.60L31-46[»]
3JA1electron microscopy3.60L51-46[»]
3JBUelectron microscopy3.6461-46[»]
3JBVelectron microscopy3.3261-46[»]
3JCDelectron microscopy3.7021-46[»]
3JCEelectron microscopy3.2021-46[»]
3JCJelectron microscopy3.70b1-46[»]
3JCNelectron microscopy4.6021-46[»]
4CSUelectron microscopy5.5061-46[»]
4U1UX-ray2.95B2/D21-46[»]
4U1VX-ray3.00B2/D21-46[»]
4U20X-ray2.90B2/D21-46[»]
4U24X-ray2.90B2/D21-46[»]
4U25X-ray2.90B2/D21-46[»]
4U26X-ray2.80B2/D21-46[»]
4U27X-ray2.80B2/D21-46[»]
4UY8electron microscopy3.8021-46[»]
4V4HX-ray3.46B2/D21-46[»]
4V4QX-ray3.46B2/D21-46[»]
4V50X-ray3.22B2/D21-46[»]
4V52X-ray3.21B2/D21-46[»]
4V53X-ray3.54B2/D21-46[»]
4V54X-ray3.30B2/D21-46[»]
4V55X-ray4.00B2/D21-46[»]
4V56X-ray3.93B2/D21-46[»]
4V57X-ray3.50B2/D21-46[»]
4V5BX-ray3.74A2/C21-46[»]
4V5Helectron microscopy5.80B61-46[»]
4V5YX-ray4.45B2/D21-46[»]
4V64X-ray3.50B2/D21-46[»]
4V65electron microscopy9.00BV1-46[»]
4V66electron microscopy9.00BV1-46[»]
4V69electron microscopy6.70B21-46[»]
4V6CX-ray3.19B2/D21-46[»]
4V6DX-ray3.81B2/D21-46[»]
4V6EX-ray3.71B2/D21-46[»]
4V6Kelectron microscopy8.25Ae1-46[»]
4V6Lelectron microscopy13.20Be1-46[»]
4V6Melectron microscopy7.10B21-46[»]
4V6Nelectron microscopy12.10A51-46[»]
4V6Oelectron microscopy14.70B51-46[»]
4V6Pelectron microscopy13.50B51-46[»]
4V6Qelectron microscopy11.50B51-46[»]
4V6Relectron microscopy11.50B51-46[»]
4V6Selectron microscopy13.10A51-46[»]
4V6Telectron microscopy8.30B21-46[»]
4V6Velectron microscopy9.80B71-46[»]
4V6Yelectron microscopy12.00B21-46[»]
4V6Zelectron microscopy12.00B21-46[»]
4V70electron microscopy17.00B21-46[»]
4V71electron microscopy20.00B21-46[»]
4V72electron microscopy13.00B21-46[»]
4V73electron microscopy15.00B21-46[»]
4V74electron microscopy17.00B21-46[»]
4V75electron microscopy12.00B21-46[»]
4V76electron microscopy17.00B21-46[»]
4V77electron microscopy17.00B21-46[»]
4V78electron microscopy20.00B21-46[»]
4V79electron microscopy15.00B21-46[»]
4V7Aelectron microscopy9.00B21-46[»]
4V7Belectron microscopy6.80B21-46[»]
4V7Celectron microscopy7.60B51-46[»]
4V7Delectron microscopy7.60A61-46[»]
4V7Ielectron microscopy9.60A21-46[»]
4V7SX-ray3.25B2/D21-46[»]
4V7TX-ray3.19B2/D21-46[»]
4V7UX-ray3.10B2/D21-46[»]
4V7VX-ray3.29B2/D21-46[»]
4V85X-ray3.2061-46[»]
4V89X-ray3.70B61-46[»]
4V9CX-ray3.30B2/D21-46[»]
4V9DX-ray3.00C2/D21-46[»]
4V9OX-ray2.90A2/C2/E2/G21-46[»]
4V9PX-ray2.90A2/C2/E2/G21-46[»]
4WF1X-ray3.09B2/D21-46[»]
4WOIX-ray3.00B2/C21-46[»]
4WWWX-ray3.10R2/Y21-46[»]
4YBBX-ray2.10C3/D31-46[»]
5ADYelectron microscopy4.5021-46[»]
5AFIelectron microscopy2.9021-46[»]
5AKAelectron microscopy5.7021-46[»]
5GADelectron microscopy3.70d1-46[»]
5GAEelectron microscopy3.33d1-46[»]
5GAFelectron microscopy4.30d1-46[»]
5GAGelectron microscopy3.80d1-46[»]
5GAHelectron microscopy3.80d1-46[»]
5H5Uelectron microscopy3.00d1-46[»]
5IQRelectron microscopy3.00d1-46[»]
5IT8X-ray3.12C3/D31-46[»]
5J5BX-ray2.80C3/D31-46[»]
5J7LX-ray3.00C3/D31-46[»]
5J88X-ray3.32C3/D31-46[»]
5J8AX-ray3.10C3/D31-46[»]
5J91X-ray2.96C3/D31-46[»]
5JC9X-ray3.03C3/D31-46[»]
5JTEelectron microscopy3.60B21-46[»]
5JU8electron microscopy3.60B21-46[»]
5KCRelectron microscopy3.60171-46[»]
5KCSelectron microscopy3.90171-46[»]
5KPSelectron microscopy3.9041-46[»]
5KPVelectron microscopy4.1031-46[»]
5KPWelectron microscopy3.9031-46[»]
5KPXelectron microscopy3.9031-46[»]
5L3Pelectron microscopy3.7071-46[»]
5LZAelectron microscopy3.6021-46[»]
5LZBelectron microscopy5.3021-46[»]
5LZCelectron microscopy4.8021-46[»]
5LZDelectron microscopy3.4021-46[»]
5LZEelectron microscopy3.5021-46[»]
5LZFelectron microscopy4.6021-46[»]
5MDVelectron microscopy2.97d1-46[»]
5MDWelectron microscopy3.06d1-46[»]
5MDYelectron microscopy3.35d1-46[»]
5MDZelectron microscopy3.10d1-46[»]
5MGPelectron microscopy3.1021-46[»]
5U4Ielectron microscopy3.5031-46[»]
5U9Felectron microscopy3.20321-46[»]
5U9Gelectron microscopy3.20321-46[»]
ProteinModelPortaliP0A7P5.
SMRiP0A7P5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP0A7P5.

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL34 family.Curated

Phylogenomic databases

eggNOGiCOG0230. LUCA.
HOGENOMiHOG000111572.
InParanoidiP0A7P5.
KOiK02914.
PhylomeDBiP0A7P5.

Family and domain databases

HAMAPiMF_00391. Ribosomal_L34. 1 hit.
InterProiView protein in InterPro
IPR000271. Ribosomal_L34.
IPR020939. Ribosomal_L34_CS.
PANTHERiPTHR14503. PTHR14503. 1 hit.
PfamiView protein in Pfam
PF00468. Ribosomal_L34. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003101. Ribosomal_L34. 1 hit.
TIGRFAMsiTIGR01030. rpmH_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00784. RIBOSOMAL_L34. 1 hit.

Sequencei

Sequence statusi: Complete.

P0A7P5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MKRTFQPSVL KRNRSHGFRA RMATKNGRQV LARRRAKGRA RLTVSK
Length:46
Mass (Da):5,380
Last modified:July 21, 1986 - v1
Checksum:i600916E398939412
GO

Mass spectrometryi

Molecular mass is 5380.5 Da from positions 1 - 46. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J01602 Genomic DNA. Translation: AAB59148.1.
X01861 Genomic DNA. Translation: CAA25982.1.
M11056 Genomic DNA. Translation: AAA24566.1.
L10328 Genomic DNA. Translation: AAA62054.1.
U00096 Genomic DNA. Translation: AAC76726.1.
AP009048 Genomic DNA. Translation: BAE77591.1.
RefSeqiNP_418158.1. NC_000913.3.
WP_000831330.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76726; AAC76726; b3703.
BAE77591; BAE77591; BAE77591.
GeneIDi32367027.
948216.
KEGGiecj:JW3680.
eco:b3703.
PATRICifig|1411691.4.peg.3000.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL34_ECOLI
AccessioniPrimary (citable) accession number: P0A7P5
Secondary accession number(s): P02437, Q2M815
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: July 5, 2017
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families